RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 IL12BP29460 328 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 CRABP1P29762 137 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ACVR1BP36896 505 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ARL4DP49703 201 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 DSCR4P56555 118 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 INSM1Q01101 510 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 HGFACQ04756 655 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MS4A18Q3C1V0 323 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 C1orf140Q5VVS0 124 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 C11orf87Q6NUJ2 197 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 WDR73Q6P4I2 378 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 IL34Q6ZMJ4 242 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ETV3LQ6ZN32 361 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 Q7L0L9 218 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 FOXRED2Q8IWF2 684 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PRSS58Q8IYP2 241 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR10H5Q8NGA6 315 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ZNF671Q8TAW3 534 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 DDIT4LQ96D03 193 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 STRADBQ9C0K7 418 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMPRSS5Q9H3S3 457 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OPA3Q9H6K4 179 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 APMAPQ9HDC9 416 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MMP26Q9NRE1 261 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ASF1BQ9NVP2 202 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMED7Q9Y3B3 224 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 AK6Q9Y3D8 172 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 PRSS37A4D1T9 235 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ELOA3DA6NLF2 546 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 FIGNL2A6NMB9 653 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 F8VVB4 439 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 F8VWA3 439 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 H7C417 338 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PRKNO60260 465 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 GLSO94925 669 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 STATHP02808 62 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 HPNP05981 417 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TACR3P29371 465 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OTX1P32242 354 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 FAUP35544 74 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 ALDH3B1P43353 468 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 DHPSP49366 369 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR12D2P58182 307 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 LSM6P62312 80 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 RPS15P62841 145 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 RPL18Q07020 188 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 RASGEF1BQ0VAM2 473 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ELOA3BQ3SY89 546 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PLEKHN1Q494U1 663 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 VWA2Q5GFL6 755 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ABLIM2Q6H8Q1 611 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 C11orf88Q6PI97 169 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SLC25A47Q6Q0C1 308 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 UNQ6494/PRO21346Q6UXR6 183 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ACOT7LQ6ZUV0 252 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ZNF248Q8NDW4 579 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ELOA3Q8NG57 546 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR4C16Q8NGL9 310 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OTOSQ8NHW6 89 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ARL11Q969Q4 196 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 C14orf144Q96I85 54 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 RASL10BQ96S79 203 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 NRIP2Q9BQI9 281 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 GGACTQ9BVM4 153 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 HCAR1Q9BXC0 346 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 LINC00470Q9BZP3 86 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMEM185BQ9H7F4 350 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 WDR76Q9H967 626 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MYOZ1Q9NP98 299 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 CHST11Q9NPF2 352 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OBP2BQ9NPH6 170 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMEM138Q9NPI0 162 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SMCO4Q9NRQ5 59 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 MTFP1Q9UDX5 166 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ZNF230Q9UIE0 474 aaPredicted RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 WASF3Q9UPY6 502 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TNRC6AQ8NDV7 1962 aaKnown RBP4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR5H14A6NHG9 310 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TMEM212A6NML5 194 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 RPL36A-HNRNPH2H7BZ11 118 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 J3QLW9 94 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SULT2B1O00204 365 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TP53I11O14683 189 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TM4SF5O14894 197 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 AGPAT2O15120 278 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PPP1R3DO95685 299 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 CD74P04233 296 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ITGB2P05107 769 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TACSTD2P09758 323 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 LIFP15018 202 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ZNF19P17023 458 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SRMP19623 302 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 CDK2P24941 298 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 LAP3P28838 519 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 SRD5A2P31213 254 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 OR1D4P47884 311 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TAS2R20P59543 309 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 TAS2R60P59551 318 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 ID2Q02363 134 aa4.75□□□□□ -1.65
VPS41-203ENST00000395969 PON3Q15166 354 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms