RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CYB5AP00167 134 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 RFPL3SP0C7P2 107 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 ALKAL2Q6UX46 152 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 Q6ZPA2 131 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 PEG10Q86TG7 708 aaKnown RBP13.49□□□□□ -0.25
CPSF7-202ENST00000394888 C12orf45Q8N5I9 185 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-202ENST00000394888 STEAP2Q8NFT2 490 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 OR9K2Q8NGE7 335 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 C19orf25Q9UFG5 118 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-202ENST00000394888 SULT2B1O00204 365 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 C4orf46Q504U0 113 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 H3F3CQ6NXT2 135 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 FAM57BQ71RH2 274 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 BHLHE23Q8NDY6 225 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 FBXW5Q969U6 566 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 SELENOIQ9C0D9 397 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 BANF2Q9H503 90 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 C5orf66Q9H5L9 145 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 DEPPQ9NTK1 212 aa13.49□□□□□ -0.25
CPSF7-202ENST00000394888 IGKV1D-8A0A087WSZ0 117 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 A0A087WZY1 265 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 LOC105371267A0A1B0GV96 52 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 PINLYPA6NC86 204 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 ZNF43P17038 809 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 SLC35A1P78382 337 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 RAB12Q6IQ22 244 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 CHMP1BQ7LBR1 199 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 LYG2Q86SG7 212 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 C20orf196Q8IYI0 205 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 ZDHHC22Q8N966 263 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 ASB13Q8WXK3 278 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 NELFAQ9H3P2 528 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 IGKV1-27A0A075B6S5 117 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 KCNAB3O43448 404 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 GNALP38405 381 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 TMED4Q7Z7H5 227 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 OR10H5Q8NGA6 315 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 KCNN3Q9UGI6 736 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 MRPS28Q9Y2Q9 187 aaKnown RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 SLC25A4P12235 298 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 HIST1H1DP16402 221 aaKnown RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 ACKR3P25106 362 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 DSCR4P56555 118 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 RPS18P62269 152 aaKnown RBP13.48□□□□□ -0.25
CPSF7-202ENST00000394888 AWAT2Q6E213 333 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 DBX2Q6ZNG2 339 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 BEST3Q8N1M1 668 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 DTWD2Q8NBA8 298 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 PLEKHA6Q9Y2H5 1048 aa13.48□□□□□ -0.25
CPSF7-202ENST00000394888 A0A0U1RQV5 110 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 POM121CA8CG34 1229 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 TNFSF11O14788 317 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 ZNF584Q8IVC4 421 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 ARHGAP5-AS1Q96IT6 56 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 FAM71F1Q96KD3 344 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-202ENST00000394888 ZNF160Q9HCG1 818 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 NXT1Q9UKK6 140 aaKnown RBP13.47□□□□□ -0.25
CPSF7-202ENST00000394888 HPP00738 406 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 PMP2P02689 132 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 CSN2P05814 226 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 ATP1B3P54709 279 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 CHAF1BQ13112 559 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 OR4K17Q8NGC6 315 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 OR5M9Q8NGP3 310 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 FGFBP3Q8TAT2 258 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 TMEM41AQ96HV5 264 aa13.47□□□□□ -0.25
CPSF7-202ENST00000394888 hCG_1807616A0A1W2PRN6 198 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 MPTX1A8MV57 137 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
CPSF7-202ENST00000394888 FGF2P09038 288 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 LIN54Q6MZP7 749 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 PSMF1Q92530 271 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 RBPMSQ93062 196 aaKnown RBP13.46□□□□□ -0.25
CPSF7-202ENST00000394888 CLEC4MQ9H2X3 399 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-202ENST00000394888 LIME1Q9H400 295 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 SMOC1Q9H4F8 434 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 FXYD6-FXYD2A0A087WZ82 144 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 SYNGR3O43761 229 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 AVPR2P30518 371 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 CXADRP78310 365 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 SCGB2B2Q4G0G5 96 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 VAX1Q5SQQ9 334 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 KLHL24Q6TFL4 600 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 SCARB1Q8WTV0 552 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 DHRS9Q9BPW9 319 aa13.46□□□□□ -0.25
CPSF7-202ENST00000394888 FXYD6Q9H0Q3 95 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms