RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CPNE4Q96A23 557 aaPredicted RBP13.19□□□□□ -0.3
GPC3-202ENST00000394299 GPER1Q99527 375 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 FOXB1Q99853 325 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 UQCC2Q9BRT2 126 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
GPC3-202ENST00000394299 SOCS1O15524 211 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 SYNGR3O43761 229 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 TOXO94900 526 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 HPNP05981 417 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 PSG4Q00888 419 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
GPC3-202ENST00000394299 FJX1Q86VR8 437 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 OR10K1Q8NGX5 313 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 ZFAND1Q8TCF1 268 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 CALHM2Q9HA72 323 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 CA10Q9NS85 328 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 PIGLQ9Y2B2 252 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 LIPGQ9Y5X9 500 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 FAM172BPA6NC97 362 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 TMEM14DPA8MWL7 114 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 BPNT1O95861 308 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 SP1P08047 785 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 FTH1P19P0C7X4 201 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 MEOX1P50221 254 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 TNK1Q13470 666 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 NKPD1Q17RQ9 610 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
GPC3-202ENST00000394299 CD163Q86VB7 1156 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 AQP3Q92482 292 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 PIGTQ969N2 578 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 ABI3Q9P2A4 366 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 BOD1L1Q8NFC6 3051 aa13.18□□□□□ -0.3
GPC3-202ENST00000394299 RGS13O14921 159 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 NKX2-8O15522 239 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 RAB3DO95716 219 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 ANXA3P12429 323 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 RAB6AP20340 208 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 CRYGSP22914 178 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 ACKR3P25106 362 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 C2orf68Q2NKX9 166 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 CHMP1BQ7LBR1 199 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 PTX4Q96A99 478 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 LPAR5Q9H1C0 372 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 DEFB127Q9H1M4 99 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 DLL4Q9NR61 685 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 SLC7A10Q9NS82 523 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 NOSIPQ9Y314 301 aaKnown RBP13.17□□□□□ -0.3
GPC3-202ENST00000394299 MEIKINA0A087WXM9 373 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 A0A096LPE4 126 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 A0A1W2PPZ6 126 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 DHRS3O75911 302 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 TGM6O95932 706 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
GPC3-202ENST00000394299 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
GPC3-202ENST00000394299 KISS1Q15726 138 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 NLRC3Q7RTR2 1065 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 SLC36A1Q7Z2H8 476 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 FGD2Q7Z6J4 655 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 TRAPPC6BQ86SZ2 158 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 UXS1Q8NBZ7 420 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 OR1F12Q8NHA8 337 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
GPC3-202ENST00000394299 ZNF224Q9NZL3 707 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 DOCK7Q96N67 2140 aa13.17□□□□□ -0.3
GPC3-202ENST00000394299 KMT2EQ8IZD2 1858 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 LCATP04180 440 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 AMY2AP04746 511 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 CST2P09228 141 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 TMEM50BP56557 158 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 PPIAP62937 165 aaKnown RBP13.16□□□□□ -0.3
GPC3-202ENST00000394299 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 RNFT1Q5M7Z0 435 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 SLC16A14Q7RTX9 510 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 FER1L6-AS2Q96M78 137 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 SLC6A7Q99884 636 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 WNT5BQ9H1J7 359 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 GPR173Q9NS66 373 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 V9GYS6 101 aa13.16□□□□□ -0.3
GPC3-202ENST00000394299 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms