RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 DYSFO75923 2080 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 CSPG4Q6UVK1 2322 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 IFNL4K9M1U5 179 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 RPP14O95059 124 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 FADS2O95864 444 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 PNPP00491 289 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF85Q03923 595 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 MZT1Q08AG7 82 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 TMEM249Q2WGJ8 235 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 ZNF684Q5T5D7 378 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 LIPNQ5VXI9 398 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 FAM220AQ7Z4H9 259 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 KCTD20Q7Z5Y7 419 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 PEG10Q86TG7 708 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 FTMTQ8N4E7 242 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 CELF2-AS1Q8N7Q2 184 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 APH1BQ8WW43 257 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 ITFG2Q969R8 447 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 MRPL48Q96GC5 212 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 LYZL4Q96KX0 146 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 ADAT1Q9BUB4 502 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 OR52A1Q9UKL2 312 aa16.07■□□□□ 0.16
PDLIM7-204ENST00000393546 YLPM1P49750 1951 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 SRSF10O75494 262 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 HEXAP06865 529 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 GNALP38405 381 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 CD200P41217 278 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 MAP2K3P46734 347 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 MVKQ03426 396 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 MFGE8Q08431 387 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 RAB40BQ12829 278 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 OR8B8Q15620 311 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 BCL2L15Q5TBC7 163 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 COMMD2Q86X83 199 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 PPP1R14AQ96A00 147 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 TMEM106BQ9NUM4 274 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 MRPS18AQ9NVS2 196 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 GNG8Q9UK08 70 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 HSPE1-MOB4S4R3N1 261 aa16.06■□□□□ 0.16
PDLIM7-204ENST00000393546 ABCA1O95477 2261 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 LRP5LA4QPB2 252 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 H0YJX3 145 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 WBP4O75554 376 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 ATP6V1B1P15313 513 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 GZMKP49863 264 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 ISL1P61371 349 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 MAB21L1Q13394 359 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 TP53I3Q53FA7 332 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 AVPI1Q5T686 147 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 CYB5R2Q6BCY4 276 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 ELMOD2Q8IZ81 293 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 C8orf59Q8N0T1 100 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 OR51E1Q8TCB6 317 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 NRG4Q8WWG1 115 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 HPS1Q92902 700 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 ERGIC1Q969X5 290 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 VCX3BQ9H321 246 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 G6PC2Q9NQR9 355 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 GPR84Q9NQS5 396 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 C14orf119Q9NWQ9 140 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 RHBDD3Q9Y3P4 386 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 WIPI2Q9Y4P8 454 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 MTORP42345 2549 aa16.05■□□□□ 0.16
PDLIM7-204ENST00000393546 ZANQ9Y493 2812 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 IGHV3-64DA0A0J9YX35 117 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 MTRF1O75570 445 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 TTRP02766 147 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 GATA4P43694 442 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 SMN1Q16637 294 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 CDONQ4KMG0 1287 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 Q71RC1 249 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 MOGAT3Q86VF5 341 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 PLPP7Q8NBV4 271 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 OR52I1Q8NGK6 324 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 OR8S1Q8NH09 359 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 CNIH3Q8TBE1 160 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 RORBQ92753 470 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 FAM71F1Q96KD3 344 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 SOX7Q9BT81 388 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 PAPOLGQ9BWT3 736 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 NARFLQ9H6Q4 476 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 INPP5EQ9NRR6 644 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 MYRFQ9Y2G1 1151 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 MPC1Q9Y5U8 109 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 NPTNQ9Y639 398 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 TANC2Q9HCD6 1990 aa16.04■□□□□ 0.16
PDLIM7-204ENST00000393546 LRRC30A6NM36 301 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 CD5LO43866 347 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 FAM20BO75063 409 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 CST4P01036 141 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 IGLV3-1P01715 115 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 IGHV4-31P0DP07 118 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ACKR3P25106 362 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ACTA2P62736 377 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 ACTG2P63267 376 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 KRTAP1-1Q07627 177 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 RIPPLY1Q0D2K3 151 aa16.03■□□□□ 0.16
PDLIM7-204ENST00000393546 GALEQ14376 348 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms