RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZNF823P16415 610 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 AMY2BP19961 511 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 FCGR2CP31995 323 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 GUK1Q16774 197 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 ANGPTL5Q86XS5 388 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ASB17Q8WXJ9 295 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 VSTM2LQ96N03 204 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ADOQ96SZ5 270 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 LRRC61Q9BV99 259 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 GDF2Q9UK05 429 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 NOSIPQ9Y314 301 aaKnown RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 LRP12Q9Y561 859 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 KPTNQ9Y664 436 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 THADAQ6YHU6 1953 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 A0A1W2PP11 408 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 XRCC2O43543 280 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 GATCO43716 136 aaKnown RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 RAB5CP51148 216 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 C19orf47Q8N9M1 422 aaKnown RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 OR8B4Q96RC9 309 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ABHD6Q9BV23 337 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 MMP25Q9NPA2 562 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 COA3Q9Y2R0 106 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 FBP1P09467 338 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 RSU1Q15404 277 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 NPSR1Q6W5P4 371 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 P4HA3Q7Z4N8 544 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
SDC1-202ENST00000381150 OR9K2Q8NGE7 335 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 ZNF700Q9H0M5 742 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 SLCO5A1Q9H2Y9 848 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 GFOD1Q9NXC2 390 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 PCDH15Q96QU1 1955 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 IGKV1D-42A0A075B6H8 117 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 CTSEP14091 401 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 RPL12P30050 165 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 GABRA4P48169 554 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 C21orf62-AS1Q17RA5 79 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 ZNF343Q6P1L6 599 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 DMBX1Q8NFW5 382 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 SSX3Q99909 188 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 POLR1DQ9Y2S0 133 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 NSA2O95478 260 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 DIRAS3O95661 229 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 CTLA4P16410 223 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 ZNF84P51523 738 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 ACY1Q03154 408 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 ANKRD55Q3KP44 614 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 TMEM128Q5BJH2 165 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 MED25Q71SY5 747 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 PNLDC1Q8NA58 520 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 FAM213BQ8TBF2 198 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 TGM7Q96PF1 710 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 UNKLQ9H9P5 680 aaKnown RBP12.32□□□□□ -0.44
SDC1-202ENST00000381150 PDE7BQ9NP56 450 aa12.32□□□□□ -0.44
SDC1-202ENST00000381150 RAB27BO00194 218 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 MFNGO00587 321 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 SCDO00767 359 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 HEXAP06865 529 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CSNK2A1P68400 391 aaPredicted RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 EGR3Q06889 387 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 ZNF141Q15928 474 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 SSX2Q16385 188 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 ACKR1Q16570 336 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 DNM1P46Q6ZS02 220 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 CSNK2A3Q8NEV1 391 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 OR5H2Q8NGV7 314 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 OCSTAMPQ9BR26 566 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 OR8D2Q9GZM6 311 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 GAR1Q9NY12 217 aaKnown RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 B4DGG1 531 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 QDPRP09417 244 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 RBMXP38159 391 aaKnown RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 GPR3P46089 330 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms