RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RNF4P78317 190 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 PMPCAQ10713 525 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 PPP1R1AQ13522 171 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ACTBL2Q562R1 376 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 RNASE10Q5GAN6 216 aaKnown RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 TRAPPC6BQ86SZ2 158 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF679Q8IYX0 411 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 DOCK7Q96N67 2140 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM100Q9NV29 134 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CACFD1Q9UGQ2 172 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CSAG2Q9Y5P2 127 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 RALGAPA1Q6GYQ0 2036 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 DMDP11532 3685 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 KIR2DS5A0A0G2JLQ3 304 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A0G2JNG1 304 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 FAM221BA6H8Z2 402 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 KIR2DS3K7RE56 304 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC25A4P12235 298 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 CDAP32320 146 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 LPAR6P43657 344 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 GSK3AP49840 483 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 RASGEF1BQ0VAM2 473 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 KIR2DS5Q14953 304 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 MAMDC2Q7Z304 686 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 UBAC2Q8NBM4 344 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 OR4K17Q8NGC6 315 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 OR52N4Q8NGI2 321 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 CPNE4Q96A23 557 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 POTEKPQ9BYX7 375 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 PDE7BQ9NP56 450 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 PPP4R1LQ9P1A2 415 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM14AQ9Y6G1 99 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ZDBF2Q9HCK1 2354 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 NCOR1O75376 2440 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC17A2O00624 439 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 IFNA6P05013 189 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 HRH1P35367 487 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 EFNA3P52797 238 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 OR1D5P58170 312 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 DMWDQ09019 674 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 FUT7Q11130 342 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 RSU1Q15404 277 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM244Q5VVB8 128 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 FJX1Q86VR8 437 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 EXD3Q8N9H8 876 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 RRNAD1Q96FB5 475 aaKnown RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 OBP2AQ9NY56 170 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 LPAR3Q9UBY5 353 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 MED6O75586 246 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 AHSA1O95433 338 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ITGB2P05107 769 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 RABIFP47224 123 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 PCP4P48539 62 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 CDCP2Q5VXM1 449 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF585AQ6P3V2 769 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 PAQR4Q8N4S7 273 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 BHLHE23Q8NDY6 225 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 ST7LQ8TDW4 575 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
PRPF40B-202ENST00000380281 COL6A3P12111 3177 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 PRAMEF26H0Y7S4 382 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 ERCC1P07992 297 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 H2BFMP0C1H6 154 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 NPY4RP50391 375 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 RPL27P61353 136 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF248Q8NDW4 579 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 MARCH1Q8TCQ1 289 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 MCHR2Q969V1 340 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 KIRREL1Q96J84 757 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 CUTCQ9NTM9 273 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 VSX1Q9NZR4 365 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 NSA2O95478 260 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 MPIG6BO95866 241 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 RPS10P46783 165 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms