RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TTTY12Q9BZ98 90 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 PTAFRP25105 342 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 HTR2BP41595 481 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 ASAH1Q13510 395 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 CSRP2Q16527 193 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 RNLSQ5VYX0 342 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 MEIKINA0A087WXM9 373 aa18.88■□□□□ 0.61
SKI-201ENST00000378536 MAP1BP46821 2468 aaKnown RBP18.88■□□□□ 0.61
SKI-201ENST00000378536 ACP1P24666 158 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 TMEM105Q8N8V8 129 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 SEC22AQ96IW7 307 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 FAM90A27PA6NNH2 459 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 ALOX5APP20292 161 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 SMIM21Q3B7S5 101 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 TSEN54Q7Z6J9 526 aaKnown RBP18.87■□□□□ 0.61
SKI-201ENST00000378536 OR6K3Q8NGY3 331 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 NUDCD2Q8WVJ2 157 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 PLPPR5Q32ZL2 321 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 ARHGEF39Q8N4T4 335 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 ADAT1Q9BUB4 502 aaKnown RBP18.87■□□□□ 0.61
SKI-201ENST00000378536 PLEKHF2Q9H8W4 249 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 DNPH1O43598 174 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 AKR1D1P51857 326 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 SFRP5Q5T4F7 317 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 HS3ST3B1Q9Y662 390 aa18.87■□□□□ 0.61
SKI-201ENST00000378536 ZNF705EA8MWA4 302 aaPredicted RBP18.86■□□□□ 0.61
SKI-201ENST00000378536 TSPAN15O95858 294 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 SELENOPP49908 381 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 ZNF2Q9BSG1 426 aaPredicted RBP18.86■□□□□ 0.61
SKI-201ENST00000378536 K7EPK0 472 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 SULT1C2O00338 296 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 LGI3Q8N145 548 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 FAM71E2Q8N5Q1 922 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 FN3KRPQ9HA64 309 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 GFOD1Q9NXC2 390 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 FUT5Q11128 374 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 SLAMF9Q96A28 289 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 FBXO17Q96EF6 278 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 K7ESF4 209 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 SPRY3O43610 288 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 CRYBB2P43320 205 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 RHEBQ15382 184 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 OR2T2Q6IF00 324 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 OR6S1Q8NH40 331 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 SUN5Q8TC36 379 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 UNC13CQ8NB66 2214 aa18.86■□□□□ 0.61
SKI-201ENST00000378536 GFRA3O60609 400 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 PATE4P0C8F1 98 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 HOXA1P49639 335 aaPredicted RBP18.85■□□□□ 0.61
SKI-201ENST00000378536 LSM6P62312 80 aaKnown RBP18.85■□□□□ 0.61
SKI-201ENST00000378536 GNG3P63215 75 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■□□□ 12.2
SKI-201ENST00000378536 OR2AE1Q8NHA4 323 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 UCN2Q96RP3 112 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 SEC22CQ9BRL7 303 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 FAM221AA4D161 298 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 OPRM1P35372 400 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 BTG1P62324 171 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 TMEM68Q96MH6 324 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 GUCD1Q96NT3 240 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 ANGPTL4Q9BY76 406 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 NKX2-8O15522 239 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 RIMS4Q9H426 269 aaPredicted RBP18.85■□□□□ 0.61
SKI-201ENST00000378536 MSTNO14793 375 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 SNCAP37840 140 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 RFX2P48378 723 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 ZNF92Q03936 586 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 ZNF528Q3MIS6 628 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 KANSL1Q7Z3B3 1105 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 CDC20BQ86Y33 519 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 ABHD3Q8WU67 409 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 ZNF285Q96NJ3 590 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 FBXO7Q9Y3I1 522 aa18.85■□□□□ 0.61
SKI-201ENST00000378536 TMEM200CA6NKL6 621 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 ANGPTL7O43827 346 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 MED6O75586 246 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 TNFRSF1AP19438 455 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 LSM11P83369 360 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■□□ 18.9
SKI-201ENST00000378536 ZNF85Q03923 595 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 SSX1Q16384 188 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 TMEM108Q6UXF1 575 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 NUFIP2Q7Z417 695 aaKnown RBP18.84■□□□□ 0.61
SKI-201ENST00000378536 OR2Z1Q8NG97 314 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 NMNAT2Q9BZQ4 307 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 ASF1BQ9NVP2 202 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 A0A1B0GTH9 108 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 XRCC3O43542 346 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 IFNA4P05014 189 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 ANXA7P20073 488 aaKnown RBP18.84■□□□□ 0.61
SKI-201ENST00000378536 FCN2Q15485 313 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 ADIPOR1Q96A54 375 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 MLXQ9UH92 298 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 C6orf183Q5T699 404 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 MRM2Q9UI43 246 aaKnown RBP18.84■□□□□ 0.61
SKI-201ENST00000378536 BEX5Q5H9J7 111 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 SLC25A30Q5SVS4 291 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 ELP2Q6IA86 826 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 UQCC2Q9BRT2 126 aa18.84■□□□□ 0.61
SKI-201ENST00000378536 SSTR2P30874 369 aa18.83■□□□□ 0.61
SKI-201ENST00000378536 IGLV3-21P80748 117 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms