RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TLX3O43711 291 aaPredicted RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 CRHP06850 196 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 EIF1P41567 113 aaKnown RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 CBX5P45973 191 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 EIF3IQ13347 325 aaKnown RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 ZNF273Q14593 569 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 RTN4RL2Q86UN3 420 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 CCDC36Q8IYA8 594 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 OR2I1PQ8NGU4 316 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 SPACA9Q96E40 222 aaPredicted RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 SPSB2Q99619 263 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 OCSTAMPQ9BR26 566 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 URM1Q9BTM9 101 aaKnown RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 CHMP1AQ9HD42 196 aaPredicted RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 GPR132Q9UNW8 380 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 EML6Q6ZMW3 1958 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 AQP7P3A6NL99 342 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 F5H0A9 414 aaPredicted RBP16.06■□□□□ 0.16
TDP2-202ENST00000378198 TRIM77I1YAP6 450 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 ZNF17P17021 662 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 SERPINF1P36955 418 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 FADS6Q8N9I5 356 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 TMEM185AQ8NFB2 350 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 OR4K17Q8NGC6 315 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 SCGB3A2Q96PL1 93 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 RASL10BQ96S79 203 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 GPER1Q99527 375 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 CDC6Q99741 560 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 DEFB126Q9BYW3 111 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 BANF2Q9H503 90 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 APOC3P02656 99 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 GP1BAP07359 652 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 NR2C1P13056 603 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 TMEM50BP56557 158 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 PPIAP62937 165 aaKnown RBP16.05■□□□□ 0.16
TDP2-202ENST00000378198 SLC35A1P78382 337 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 TMEM176BQ3YBM2 270 aaPredicted RBP16.05■□□□□ 0.16
TDP2-202ENST00000378198 FAM57BQ71RH2 274 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 OR14K1Q8NGZ2 314 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 SSC4DQ8WTU2 575 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 SHDQ96IW2 340 aa16.05■□□□□ 0.16
TDP2-202ENST00000378198 A0A0B4J2A0 478 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 C13orf42A0A1B0GVH6 325 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 MFNGO00587 321 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 DKK1O94907 266 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 WDPCPO95876 746 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 CTSSP25774 331 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 SFTPDP35247 375 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 SMAD2Q15796 467 aaKnown RBP16.04■□□□□ 0.16
TDP2-202ENST00000378198 WDSUB1Q8N9V3 476 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 DUSP23Q9BVJ7 150 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 SLC26A1Q9H2B4 701 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 GHRLQ9UBU3 117 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 SHPKQ9UHJ6 478 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 TRBV6-7A0A0A0MS04 114 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 A0A1W2PQM1 296 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 RAMP1O60894 148 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 CRTAPO75718 401 aaPredicted RBP16.04■□□□□ 0.16
TDP2-202ENST00000378198 SFT2D2O95562 160 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 CYC1P08574 325 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 LSM6P62312 80 aaKnown RBP16.04■□□□□ 0.16
TDP2-202ENST00000378198 CCL7P80098 99 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 ELP2Q6IA86 826 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 PNLDC1Q8NA58 520 aaKnown RBP16.04■□□□□ 0.16
TDP2-202ENST00000378198 OR5H2Q8NGV7 314 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 PIGMQ9H3S5 423 aa16.04■□□□□ 0.16
TDP2-202ENST00000378198 IGHV5-10-1A0A0J9YXX1 117 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 TP53I11O14683 189 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 FPR2P25090 351 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 ARFRP1Q13795 201 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 UQCC3Q6UW78 93 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 FAM89BQ8N5H3 189 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 STOML3Q8TAV4 291 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 ARHGAP5-AS1Q96IT6 56 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 OR10A2Q9H208 303 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 C5orf66Q9H5L9 145 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 UBE2ZQ9H832 354 aaPredicted RBP16.03■□□□□ 0.16
TDP2-202ENST00000378198 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.03■□□□□ 0.16
TDP2-202ENST00000378198 CSAG2Q9Y5P2 127 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 F8VVB4 439 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 F8VWA3 439 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 RAD51DO75771 328 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 PRF1P14222 555 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 GUCA1AP43080 201 aaPredicted RBP16.03■□□□□ 0.16
TDP2-202ENST00000378198 CLDN17P56750 224 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 GFOD2Q3B7J2 385 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 LCN10Q6JVE6 187 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 TMPPEQ6ZT21 453 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 PPP1R3BQ86XI6 285 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 ARMC10Q8N2F6 343 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 OR5AP2Q8NGF4 316 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 DCUN1D4Q92564 292 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 TMEM230Q96A57 120 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 PIK3IP1Q96FE7 263 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 PGAM5Q96HS1 289 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 RAB18Q9NP72 206 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 ZC4H2Q9NQZ6 224 aa16.03■□□□□ 0.16
TDP2-202ENST00000378198 IGKV1-9A0A0C4DH69 117 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms