RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SOCS1O15524 211 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 RGS11O94810 467 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 NFYAP23511 347 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-203ENST00000378037 APLNRP35414 380 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 CLN3Q13286 438 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 PHYHD1Q5SRE7 291 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 PXKQ7Z7A4 578 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 PEG10Q86TG7 708 aaKnown RBP7.16□□□□□ -1.26
CKAP2-203ENST00000378037 TMEM251Q8N6I4 163 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 GJC3Q8NFK1 279 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 OR2V1Q8NHB1 315 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 MFSD8Q8NHS3 518 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 RGP1Q92546 391 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF175Q9Y473 711 aa7.16□□□□□ -1.26
CKAP2-203ENST00000378037 LSM5Q9Y4Y9 91 aaKnown RBP7.16□□□□□ -1.26
CKAP2-203ENST00000378037 CHCHD2Q9Y6H1 151 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF587BE7ETH6 402 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 I3L521 148 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CDC14BO60729 498 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF35P13682 527 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 LIFP15018 202 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 RPS4Y1P22090 263 aaKnown RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 DSCR4P56555 118 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 RAB15P59190 212 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 PRB3Q04118 309 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 Q0VFX4 171 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 UNQ6126/PRO20091Q6UXV3 157 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR4C16Q8NGL9 310 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR4K15Q8NH41 348 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 DEDD2Q8WXF8 326 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 SNAPC3Q92966 411 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 RBMXL1Q96E39 390 aaKnown RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 PCED1AQ9H1Q7 454 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR10A2Q9H208 303 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 MSL2Q9HCI7 577 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 STEAP1Q9UHE8 339 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 PRSS50Q9UI38 385 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 ST6GALNAC2Q9UJ37 374 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 TACC2O95359 2948 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 TRGV5A0A0B4J1U4 118 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 TRIM64CA6NLI5 447 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 PYCARD-AS1I3L0S3 204 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 AIPO00170 330 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 KLF4O43474 513 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 GPRIN2O60269 458 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CREBL2O60519 120 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 NGFP01138 241 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 IGHA1P01876 353 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 HPXP02790 462 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CLPSP04118 112 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 SERPINA7P05543 415 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CA6P23280 308 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 IL13RA1P78552 427 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 SNAI3Q3KNW1 292 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 STEAP1BQ6NZ63 245 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 FJX1Q86VR8 437 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR1M1Q8NGA1 313 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 OR51F2Q8NH61 342 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 NUBPLQ8TB37 319 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 POC1BQ8TC44 478 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 ASB10Q8WXI3 467 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CPNE2Q96FN4 548 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 REEP6Q96HR9 211 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 ARHGAP5-AS1Q96IT6 56 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 CPNE5Q9HCH3 593 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 GPN1Q9HCN4 374 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 SCP2D1Q9UJQ7 156 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 RNF150Q9ULK6 438 aa7.15□□□□□ -1.26
CKAP2-203ENST00000378037 SF3B6Q9Y3B4 125 aaKnown RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-203ENST00000378037 DOPEY1Q5JWR5 2465 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 CENPBD1B2RD01 187 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 SIRPB1O00241 398 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 LYPD3O95274 346 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 YES1P07947 543 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 GNRHRP30968 328 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 ZNF83P51522 516 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 MC2RQ01718 297 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 SSPNQ14714 243 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 BCL2A1Q16548 175 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 PCK2Q16822 640 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 FBXL14Q8N1E6 418 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 ZNF687Q8N1G0 1237 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 OR51H1Q8NH63 302 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 MARCH1Q8TCQ1 289 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 ASB5Q8WWX0 329 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 SEH1LQ96EE3 360 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 URM1Q9BTM9 101 aaKnown RBP7.15□□□□□ -1.27
CKAP2-203ENST00000378037 FAAP24Q9BTP7 215 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 SLC19A3Q9BZV2 496 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 NIPAL2Q9H841 368 aa7.15□□□□□ -1.27
CKAP2-203ENST00000378037 ISPDA4D126 451 aa7.14□□□□□ -1.27
CKAP2-203ENST00000378037 SLC22A20A6NK97 555 aa7.14□□□□□ -1.27
CKAP2-203ENST00000378037 OR6C76A6NM76 312 aa7.14□□□□□ -1.27
CKAP2-203ENST00000378037 GJE1A6NN92 205 aa7.14□□□□□ -1.27
CKAP2-203ENST00000378037 UBL3O95164 117 aa7.14□□□□□ -1.27
CKAP2-203ENST00000378037 ANXA3P12429 323 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms