RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CNN2Q99439 309 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 TEAD3Q99594 435 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 PAPOLGQ9BWT3 736 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 SSBP3Q9BWW4 388 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 TMPRSS13Q9BYE2 586 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 MROQ9BYG7 248 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 GABARAPL1Q9H0R8 117 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 TMEM165Q9HC07 324 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 C14orf119Q9NWQ9 140 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 RNF7Q9UBF6 113 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 ENOPH1Q9UHY7 261 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 IKZF2Q9UKS7 526 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 OAZ3Q9UMX2 235 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 GTF2A1LQ9UNN4 478 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 LRP12Q9Y561 859 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 ZAR1LA6NP61 321 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 F5H0A9 414 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 EPHA1P21709 976 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 GATA3P23771 443 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 THBS2P35442 1172 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 DDOSTP39656 456 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 GSK3AP49840 483 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 PSMA6P60900 246 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 KPNB1Q14974 876 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 SLX4IPQ5VYV7 408 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 KDM4DQ6B0I6 523 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 KCTD18Q6PI47 426 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 KCTD8Q6ZWB6 473 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 ASRGL1Q7L266 308 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 FTMTQ8N4E7 242 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 SPERTQ8NA61 448 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 OR8B12Q8NGG6 310 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 NANPQ8TBE9 248 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 FAM81AQ8TBF8 368 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 Q8TCH9 128 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 CENPNQ96H22 339 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 CIB1Q99828 191 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 TMEM246Q9BRR3 403 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 MRI1Q9BV20 369 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 YIPF3Q9GZM5 350 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 MMP26Q9NRE1 261 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF319Q9P2F9 582 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 MIOXQ9UGB7 285 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 LRCH1Q9Y2L9 728 aa9.7□□□□□ -0.86
SMARCE1-203ENST00000377808 A0A1B0GWJ7 208 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 SLC22A31A6NKX4 558 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 ANXA2P2A6NMY6 339 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 ALOX5APP20292 161 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 EPHA2P29317 976 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 PITPNBP48739 271 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 ARMCX4Q5H9R4 360 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 C12orf73Q69YU5 71 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 BTNL3Q6UXE8 466 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 C1orf229Q6ZS94 237 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF826PQ6ZT77 177 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 RHOUQ7L0Q8 258 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 MEPCEQ7L2J0 689 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 PRSS45Q7RTY3 260 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 C1QL2Q7Z5L3 287 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 SLC35F2Q8IXU6 374 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 BPIFB2Q8N4F0 458 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 CSNK2A3Q8NEV1 391 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 TMEM163Q8TC26 289 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 C22orf15Q8WYQ4 148 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 PIGCQ92535 297 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 NEIL1Q96FI4 390 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 TECTBQ96PL2 329 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 RGCCQ9H4X1 137 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 NIPAL2Q9H841 368 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 COPS3Q9UNS2 423 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 RHBDD3Q9Y3P4 386 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 ORC6Q9Y5N6 252 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 AUP1Q9Y679 476 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 TMEM14AQ9Y6G1 99 aa9.69□□□□□ -0.86
SMARCE1-203ENST00000377808 TMEM269A0A1B0GVZ9 245 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF850A8MQ14 1090 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 TRAPPC2LH3BP13 241 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 EBAG9O00559 213 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 WNT2P09544 360 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 RIDAP52758 137 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 GMFBP60983 142 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 CXCR4P61073 352 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ACTR3P61158 418 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF154Q13106 437 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 KCNJ8Q15842 424 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 SNCBQ16143 134 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF829Q3KNS6 432 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 NXNL2Q5VZ03 156 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 LYPD2Q6UXB3 125 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 DCDC5Q6ZRR9 648 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 GID4Q8IVV7 300 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 SPATA3Q8NHX4 192 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms