RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF221Q9UK13 617 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 FLVCR1Q9Y5Y0 555 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 BRCA2P51587 3418 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ARRDC5A6NEK1 342 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 A8MV72 311 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 LGALS8O00214 317 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 SCGNO76038 276 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 CTSSP25774 331 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 CHRNB4P30926 498 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 PYHIN1Q6K0P9 492 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 BMPERQ8N8U9 685 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 NFAM1Q8NET5 270 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 MAFIPQ8WZ33 124 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF286AQ9HBT8 521 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 LAMP3Q9UQV4 416 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 SESN1Q9Y6P5 492 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 LAMA3Q16787 3333 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 PTPRDP23468 1912 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 RAMP1O60894 148 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 GCM2O75603 506 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 NGFRP08138 427 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF17P17021 662 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 GABRA4P48169 554 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 SWI5Q1ZZU3 235 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF658BQ4V348 819 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 TPRA1Q86W33 373 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 RFESDQ8TAC1 157 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 PTP4A1Q93096 173 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 SNRNP40Q96DI7 357 aaKnown RBP7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF285Q96NJ3 590 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 NICN1Q9BSH3 213 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 GABARAPL1Q9H0R8 117 aa7.48□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF354AO60765 605 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TGM1P22735 817 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TNFSF8P32971 234 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 MICBQ29980 383 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 LYPD8Q6UX82 237 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF517Q6ZMY9 492 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 NUFIP2Q7Z417 695 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 DUS3LQ96G46 650 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 RAB1BQ9H0U4 201 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 MOB1AQ9H8S9 216 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TAS2R8Q9NYW2 309 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 LIPGQ9Y5X9 500 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 PHF3Q92576 2039 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SH2D1BO14796 132 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SPINT2O43291 252 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZFPL1O95159 310 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 IGHV3-13P01766 116 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 IGHV3-7P01780 117 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 DDOSTP39656 456 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 OPRL1P41146 370 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 GZMMP51124 257 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ERVK-16P61578 105 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TLE1Q04724 770 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TNK1Q13470 666 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZFP69Q49AA0 526 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 CLVS2Q5SYC1 327 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SYS1Q8N2H4 156 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZPLD1Q8TCW7 415 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 WNT2BQ93097 391 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SMIM19Q96E16 107 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 PELI1Q96FA3 418 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SRXN1Q9BYN0 137 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF703Q9H7S9 590 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 BCO1Q9HAY6 547 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 NUDT15Q9NV35 164 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ST3GAL6Q9Y274 331 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 FLNBO75369 2602 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 HIVEP3Q5T1R4 2406 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 GBF1Q92538 1859 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 H7C417 338 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 ZG16O60844 167 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 IL1AP01583 271 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 HOXD11P31277 338 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 UGT2B10P36537 528 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 TGFBR1P36897 503 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SLC25A1P53007 311 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 SUCLG1P53597 346 aaKnown RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 CAMK2BQ13554 666 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 HLXQ14774 488 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 C20orf196Q8IYI0 205 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 INO80EQ8NBZ0 244 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 NPEPL1Q8NDH3 523 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 THAP6Q8TBB0 222 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 THAP7Q9BT49 309 aaPredicted RBP7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 DUSP21Q9H596 190 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 GPR27Q9NS67 375 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 RCE1Q9Y256 329 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 FRMPD3Q5JV73 1810 aa7.47□□□□□ -1.21
CRNKL1-202ENST00000377340 LPLP06858 475 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms