RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ASF1BQ9NVP2 202 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 A0A0B4J2A0 478 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 A0A0D9SG52 128 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 KRBOX1C9JBD0 128 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 MELTFP08582 738 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 FGF2P09038 288 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 UBBP0CG47 229 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 ZNF17P17021 662 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 CXCL12P48061 93 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 RPS27AP62979 156 aaKnown RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 UBA52P62987 128 aaKnown RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 TAGLNQ01995 201 aaKnown RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 SLC22A8Q8TCC7 542 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 MITD1Q8WV92 249 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 MRPS24Q96EL2 167 aaKnown RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 UQCC2Q9BRT2 126 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 ZNF701Q9NV72 531 aaPredicted RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 SHPKQ9UHJ6 478 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 TMEM14DPA8MWL7 114 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 STMND1H3BQB6 276 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 KNG1P01042 644 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 AMY2BP19961 511 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 TMEM50BP56557 158 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 CHAF1BQ13112 559 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 OR2W3Q7Z3T1 314 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 KCNRGQ8N5I3 272 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 DNASE2BQ8WZ79 361 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 WNT2BQ93097 391 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 PTX4Q96A99 478 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 ZNF385AQ96PM9 386 aaKnown RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 CHMP1AQ9HD42 196 aaPredicted RBP14.34□□□□□ -0.11
TRIM27-202ENST00000377199 GSKIPQ9P0R6 139 aa14.34□□□□□ -0.11
TRIM27-202ENST00000377199 IGLV3-12A0A075B6K2 115 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 IGKV1-9A0A0C4DH69 117 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 BCL2L11O43521 198 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 ZNF205O95201 554 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 CD8AP01732 235 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 P2RY4P51582 365 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 SPEM1Q8N4L4 309 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 ELP5Q8TE02 316 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 ZNF160Q9HCG1 818 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 OR2S2Q9NQN1 319 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 SEMA5BQ9P283 1151 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 A0A1W2PNV4 684 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 CFIP05156 583 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 OR3A2P47893 321 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 NKAPLQ5M9Q1 402 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 PHYHD1Q5SRE7 291 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 ACOT7LQ6ZUV0 252 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 TMEM200AQ86VY9 491 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 DTX1Q86Y01 620 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 SHARPINQ9H0F6 387 aa14.33□□□□□ -0.12
TRIM27-202ENST00000377199 COL5A1P20908 1838 aaPredicted RBP14.33□□□□□ -0.12
TRIM27-202ENST00000377199 HIST1H1DP16402 221 aaKnown RBP14.32□□□□□ -0.12
TRIM27-202ENST00000377199 GABRR1P24046 479 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 GPR85P60893 370 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 TNRC18O15417 2968 aaPredicted RBP14.32□□□□□ -0.12
TRIM27-202ENST00000377199 CSNK2A1P68400 391 aaPredicted RBP14.32□□□□□ -0.12
TRIM27-202ENST00000377199 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.32□□□□□ -0.12
TRIM27-202ENST00000377199 CSNK2A3Q8NEV1 391 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 KCNG3Q8TAE7 436 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 PAQR8Q8TEZ7 354 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 OXGR1Q96P68 337 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 GAREM1Q9H706 876 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 METTL8Q9H825 291 aaKnown RBP14.32□□□□□ -0.12
TRIM27-202ENST00000377199 ACKR4Q9NPB9 350 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 RASL12Q9NYN1 266 aa14.32□□□□□ -0.12
TRIM27-202ENST00000377199 CDK2AP1O14519 115 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 BLVRBP30043 206 aaPredicted RBP14.31□□□□□ -0.12
TRIM27-202ENST00000377199 SNTB1Q13884 538 aaKnown RBP14.31□□□□□ -0.12
TRIM27-202ENST00000377199 COL19A1Q14993 1142 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 OVCH2Q7RTZ1 564 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 OR5H2Q8NGV7 314 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 OR6S1Q8NH40 331 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 TERB2Q8NHR7 220 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 EDAQ92838 391 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 MR1Q95460 341 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 FBXW5Q969U6 566 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 ZNF837Q96EG3 531 aaPredicted RBP14.31□□□□□ -0.12
TRIM27-202ENST00000377199 C5orf66Q9H5L9 145 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 PNRC2Q9NPJ4 139 aaKnown RBP14.31□□□□□ -0.12
TRIM27-202ENST00000377199 SLC2A8Q9NY64 477 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 CCDC85CA6NKD9 419 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 SNAPC5O75971 98 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 OR2F2O95006 317 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 HOXB5P09067 269 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 CCL3P10147 92 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 CD37P11049 281 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 FCGR2AP12318 317 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 PNLIPP16233 465 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 GLRA1P23415 457 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 CALCRP30988 508 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 CSNK1A1P48729 337 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 OR2F1Q13607 317 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 KISS1Q15726 138 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 LPCAT3Q6P1A2 487 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 SLC25A47Q6Q0C1 308 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 ZDHHC22Q8N966 263 aa14.31□□□□□ -0.12
TRIM27-202ENST00000377199 BPIFCQ8NFQ6 507 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms