RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 HIST1H2AAQ96QV6 131 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 FAM86C1Q9NVL1 165 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 TSPAN2O60636 221 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 ATG12O94817 140 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 IGKV3-11P04433 115 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 FAM157BP0CG42 384 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 CASRP41180 1078 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
DDR1-227ENST00000376570 CD200R1LQ6Q8B3 271 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 C6orf201Q7Z4U5 140 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 ADGRE4PQ86SQ3 457 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 OR5M9Q8NGP3 310 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 ARHGAP5-AS1Q96IT6 56 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 SORCS2Q96PQ0 1159 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 URM1Q9BTM9 101 aaKnown RBP10.37□□□□□ -0.75
DDR1-227ENST00000376570 RALYQ9UKM9 306 aaKnown RBP10.37□□□□□ -0.75
DDR1-227ENST00000376570 FZR1Q9UM11 496 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 CLDN16Q9Y5I7 305 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 R4GMQ9 66 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
DDR1-227ENST00000376570 PHYHO14832 338 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 MRPL33O75394 65 aaKnown RBP10.36□□□□□ -0.75
DDR1-227ENST00000376570 ITGB2P05107 769 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ERCC1P07992 297 aaPredicted RBP10.36□□□□□ -0.75
DDR1-227ENST00000376570 DUSP3P51452 185 aaPredicted RBP10.36□□□□□ -0.75
DDR1-227ENST00000376570 CXorf67Q86X51 503 aaPredicted RBP10.36□□□□□ -0.75
DDR1-227ENST00000376570 TMEM105Q8N8V8 129 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ASB17Q8WXJ9 295 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 MVB12AQ96EY5 273 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ZNF649Q9BS31 505 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 STRADBQ9C0K7 418 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 OR14J1Q9UGF5 321 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 PLXNA2O75051 1894 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 NPIPB9F8W1W9 429 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 MS4A18H0YCH9 400 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ADAP1O75689 374 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 CSF1P09603 554 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 CYB561P49447 251 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 RAP2BP61225 183 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 MFSD13AQ14CX5 517 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 C2orf68Q2NKX9 166 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 MS4A18Q3C1V0 323 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ANKRD16Q6P6B7 361 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 SLC19A3Q9BZV2 496 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 P4HTMQ9NXG6 502 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 SHISA7A6NL88 538 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 M0R135 149 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 GLSO94925 669 aaPredicted RBP10.36□□□□□ -0.75
DDR1-227ENST00000376570 MMP15P51511 669 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 BDH1Q02338 343 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 TSC22D1Q15714 1073 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 RABEPKQ7Z6M1 372 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 SPAG16Q8N0X2 631 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 ZNF799Q96GE5 643 aa10.36□□□□□ -0.75
DDR1-227ENST00000376570 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 PRR19A6NJB7 356 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 HS3ST1O14792 307 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 F12P00748 615 aaPredicted RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 IGHV3-13P01766 116 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 IGHV3-7P01780 117 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 TAS2R19P59542 299 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 AIMP2Q13155 320 aaKnown RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 ALKBH6Q3KRA9 238 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 FAM122BQ7Z309 247 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 STPG2Q8N412 459 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 ZNF485Q8NCK3 441 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 OR8B12Q8NGG6 310 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 OR10R2Q8NGX6 335 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 RDH5Q92781 318 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 NAA11Q9BSU3 229 aaPredicted RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 PCDHGA9Q9Y5G4 932 aaKnown RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 MEIKINA0A087WXM9 373 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 M0R036 132 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 TNFSF15O95150 251 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 MPLP40238 635 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 RIN1Q13671 783 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 SWI5Q1ZZU3 235 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 SEZ6L2Q6UXD5 910 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 GLRX5Q86SX6 157 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 MISPQ8IVT2 679 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 WDFY1Q8IWB7 410 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 FNDC9Q8TBE3 224 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 GFI1Q99684 422 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 NOSIPQ9Y314 301 aaKnown RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 ANKUB1A6NFN9 424 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 RFPL3SP0C7P2 107 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 CXCL2P19875 107 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 GNRHRP30968 328 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 RBM39Q14498 530 aaKnown RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 C1orf210Q8IVY1 113 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 GTPBP8Q8N3Z3 284 aaPredicted RBP10.35□□□□□ -0.75
DDR1-227ENST00000376570 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 OR11G2Q8NGC1 345 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
DDR1-227ENST00000376570 FRYQ5TBA9 3013 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms