RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ZNF576Q9H609 170 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ABCA7Q8IZY2 2146 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
MSH5-201ENST00000375703 CRTAPO75718 401 aaPredicted RBP12.86□□□□□ -0.35
MSH5-201ENST00000375703 OR2J2O76002 312 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 TIAF1O95411 115 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 QDPRP09417 244 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ZNF17P17021 662 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ZNF43P17038 809 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
MSH5-201ENST00000375703 FAM57BQ71RH2 274 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 GTPBP8Q8N3Z3 284 aaPredicted RBP12.86□□□□□ -0.35
MSH5-201ENST00000375703 ARRDC1Q8N5I2 433 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ZNF283Q8N7M2 679 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 OR6C1Q96RD1 312 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 WDR77Q9BQA1 342 aaPredicted RBP12.86□□□□□ -0.35
MSH5-201ENST00000375703 MYOTQ9UBF9 498 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 WIF1Q9Y5W5 379 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 SPAG17Q6Q759 2223 aa12.86□□□□□ -0.35
MSH5-201ENST00000375703 ZNF726A6NNF4 738 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ZNF814B7Z6K7 855 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ZFAND5O76080 213 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 PRKACAP17612 351 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ACTBL2Q562R1 376 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 VAX1Q5SQQ9 334 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 ADPRHL1Q8NDY3 354 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 OR56B1Q8NGI3 324 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 OR6X1Q8NH79 312 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 OXGR1Q96P68 337 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 C5orf66Q9H5L9 145 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ASF1BQ9NVP2 202 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 BCAT2O15382 392 aaPredicted RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 RAD51DO75771 328 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 ANOS1P23352 680 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 SFTPDP35247 375 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 DCDP81605 110 aaKnown RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 SLC9A3R2Q15599 337 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 PNLIPRP3Q17RR3 467 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 UQCC3Q6UW78 93 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 DOK3Q7L591 496 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 OCSTAMPQ9BR26 566 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 URM1Q9BTM9 101 aaKnown RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 ZMAT5Q9UDW3 170 aaKnown RBP12.85□□□□□ -0.35
MSH5-201ENST00000375703 ANAPC10Q9UM13 185 aa12.85□□□□□ -0.35
MSH5-201ENST00000375703 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 MPTX1A8MV57 137 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 F8VVB4 439 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 F8VWA3 439 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
MSH5-201ENST00000375703 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
MSH5-201ENST00000375703 ACY1Q03154 408 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 ZNF169Q14929 603 aaPredicted RBP12.84□□□□□ -0.35
MSH5-201ENST00000375703 SGCAQ16586 387 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
MSH5-201ENST00000375703 DMRTC1Q5HYR2 192 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 CLEC18BQ6UXF7 455 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 OR5H2Q8NGV7 314 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 TMEM230Q96A57 120 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 MICU1Q9BPX6 476 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 PNRC2Q9NPJ4 139 aaKnown RBP12.84□□□□□ -0.35
MSH5-201ENST00000375703 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 RAMP1O60894 148 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 SCRG1O75711 98 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 SFT2D2O95562 160 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 PI3P19957 117 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 OR2M3Q8NG83 312 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 CYYR1Q96J86 154 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 CDC6Q99741 560 aa12.84□□□□□ -0.35
MSH5-201ENST00000375703 A0A0B4J2A0 478 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 FGF16O43320 207 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 ADAP1O75689 374 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 AMY2BP19961 511 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 IGFBP4P22692 258 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 OR3A2P47893 321 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 AIMP2Q13155 320 aaKnown RBP12.83□□□□□ -0.35
MSH5-201ENST00000375703 PDSS1Q5T2R2 415 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 BAP18Q8IXM2 172 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 PAQR8Q8TEZ7 354 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 ROBO4Q8WZ75 1007 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms