RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 DNASE2BQ8WZ79 361 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM41AQ96HV5 264 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 PBOV1Q9GZY1 135 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 LPAR5Q9H1C0 372 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 PDE7BQ9NP56 450 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 GSKIPQ9P0R6 139 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 GPR132Q9UNW8 380 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ASXL3Q9C0F0 2248 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 PHF3Q92576 2039 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 C9JQL5 133 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 NPIPA5E9PKD4 350 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF354AO60765 605 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 LRP3O75074 770 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 IGHMP01871 453 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 GLAP06280 429 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC2A1P11166 492 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 MYF5P13349 255 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 RCC1P18754 421 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ANOS1P23352 680 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF93P35789 620 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ID4P47928 161 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 CLDN6P56747 220 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 NXPH1P58417 271 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 SUPT4H1P63272 117 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 RAB32Q13637 225 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 PGAP1Q75T13 922 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 OR51E1Q8TCB6 317 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 SLAMF6Q96DU3 332 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 DUSP15Q9H1R2 295 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 NPIPA1Q9UND3 350 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM14DPA8MWL7 114 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 FTCDNL1E5RQL4 147 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 SDCBPO00560 298 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 HTR3BO95264 441 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 SERPINA5P05154 406 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 NME2P22392 152 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 AKR1C3P42330 323 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 LPAR6P43657 344 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 CAPZBP47756 277 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 MMP16P51512 607 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 CYCSP99999 105 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 ELAVL1Q15717 326 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 RPL7L1Q6DKI1 246 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 DRAM2Q6UX65 266 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 GRINAQ7Z429 371 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM105Q8N8V8 129 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 NUDT22Q9BRQ3 303 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 METTL8Q9H825 291 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC22A11Q9NSA0 550 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 FLVCR1Q9Y5Y0 555 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 PI4KAP42356 2102 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 SFT2D2O95562 160 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 TDGF1P13385 188 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 OR3A4PP47883 348 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM50BP56557 158 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 TAS2R31P59538 309 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 NSDHLQ15738 373 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 PCK2Q16822 640 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 OR5D14Q8NGL3 314 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 OR10S1Q8NGN2 331 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 OIT3Q8WWZ8 545 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 MAFIPQ8WZ33 124 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF775Q96BV0 537 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 CRB3Q9BUF7 120 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 WWTR1Q9GZV5 400 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 PCED1AQ9H1Q7 454 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 GPR179Q6PRD1 2367 aa12.5□□□□□ -0.41
CLCNKA-202ENST00000375692 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 PQLC2LA1A4F0 135 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 SHISA8B8ZZ34 492 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 RNASEK-C17orf49H0YIS7 233 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 LAMTOR5O43504 91 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 HOXB5P09067 269 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 GLRA1P23415 457 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 S100A10P60903 97 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 FOXK1P85037 733 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 COMMD2Q86X83 199 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 CUTCQ9NTM9 273 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 MED6O75586 246 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 PTGFRP43088 359 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms