RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 NUDT22Q9BRQ3 303 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 SERTAD3Q9UJW9 196 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF780BQ9Y6R6 833 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 ZFHX2Q9C0A1 2572 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 LMO7DNF2Z398 122 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 B3GALT2O43825 422 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 GPANK1O95872 356 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 CRYABP02511 175 aaKnown RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 IL2RGP31785 369 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 ARRB1P49407 418 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 TMEM106AQ96A25 262 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 MMABQ96EY8 250 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 Q96M85 177 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 TNFRSF13CQ96RJ3 184 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 DDA1Q9BW61 102 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 COMMD4Q9H0A8 199 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 TMED7Q9Y3B3 224 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 GOLT1BQ9Y3E0 138 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 WDR45Q9Y484 360 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 TMEM235A6NFC5 223 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 CST4P01036 141 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H1CP16403 213 aaKnown RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 CHATP28329 748 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 MAP3K8P41279 467 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 C1orf210Q8IVY1 113 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 OR9K2Q8NGE7 335 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 NTNG2Q96CW9 530 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 MUCL1Q96DR8 90 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 OPN3Q9H1Y3 402 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 AMDHD2Q9Y303 409 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 MMACHCQ9Y4U1 282 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 STK17BO94768 372 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 CSTBP04080 98 aaKnown RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 LYL1P12980 280 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 EIF2B1Q14232 305 aaKnown RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 MIDNQ504T8 468 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 GFI1BQ5VTD9 330 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TMPPEQ6ZT21 453 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 PBDC1Q9BVG4 233 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 WNT5BQ9H1J7 359 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 PRODH2Q9UF12 536 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 FREM2Q5SZK8 3169 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 A0A087WUJ7 227 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 EREGO14944 169 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 SYT7O43581 403 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 GDF9O60383 454 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 SFTPBP07988 381 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 CSNK2A2P19784 350 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 GRPRP30550 384 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TAS2R31P59538 309 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 ODF4Q2M2E3 257 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 HLA-BQ31612 363 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TMEM35AQ53FP2 167 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TRMT12Q53H54 448 aaKnown RBP10.84□□□□□ -0.67
C9orf3-203ENST00000375315 OR2T2Q6IF00 324 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 TMEM105Q8N8V8 129 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 OR13D1Q8NGV5 346 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 RELTQ969Z4 430 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 STACQ99469 402 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 KCNK15Q9H427 330 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
C9orf3-203ENST00000375315 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 SLC17A2O00624 439 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 EFSO43281 561 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 OR8G3PP0DMU2 310 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 CFPP27918 469 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 SLC10A1Q14973 349 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 DUSP5Q16690 384 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 TRIM61Q5EBN2 209 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 GGNBP1Q5YKI7 109 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 GUSBP11Q6P575 273 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 OR10J5Q8NHC4 309 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF563Q8TA94 476 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 DTD1Q8TEA8 209 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 MVB12AQ96EY5 273 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 CNTNAP3Q9BZ76 1288 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 FAM212BQ9NTI7 297 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-203ENST00000375315 CUTCQ9NTM9 273 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
C9orf3-203ENST00000375315 A0A087WV48 116 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 FGF17O60258 216 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 BTG2P78543 158 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 HYAL4Q2M3T9 481 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 SLC22A25Q6T423 547 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 THRSPQ92748 146 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 LMF1Q96S06 567 aa10.83□□□□□ -0.68
C9orf3-203ENST00000375315 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms