RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GSK3AP49840 483 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ACTBP60709 375 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ACTG1P63261 375 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 C3AR1Q16581 482 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SFRP5Q5T4F7 317 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 AWAT2Q6E213 333 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 OR10K2Q6IF99 312 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PLXDC2Q6UX71 529 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ANGPTL5Q86XS5 388 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 AKR7LQ8NHP1 331 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 FGFBP3Q8TAT2 258 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 AKAP1Q92667 903 aaKnown RBP eCLIP15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 FAM46BQ96A09 425 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 APH1AQ96BI3 265 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SGK3Q96BR1 496 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GHITMQ9H3K2 345 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF175Q9Y473 711 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TRAV17A0A0B4J275 112 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 HCKP08631 526 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 UBBP0CG47 229 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PSMB1P20618 241 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RAB25P57735 213 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ARF1P84077 181 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 HGFACQ04756 655 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PCGF3Q3KNV8 242 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MCEMP1Q8IX19 187 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 C1orf147Q96MC9 270 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 C20orf85Q9H1P6 137 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RGCCQ9H4X1 137 aa15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF107Q9UII5 783 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MRPS28Q9Y2Q9 187 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CACNA1BQ00975 2339 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 A0A0A6YYJ9 748 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RAB27BO00194 218 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 IGHV3-9P01782 118 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PATE4P0C8F1 98 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ALDH3B1P43353 468 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GUCA2AQ02747 115 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TCTE3Q8IZS6 198 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZBTB8BQ8NAP8 495 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 AQP3Q92482 292 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SEH1LQ96EE3 360 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CNTNAP3BQ96NU0 1288 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CNTNAP3Q9BZ76 1288 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PIGLQ9Y2B2 252 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FCGR2AP12318 317 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FAHP16930 419 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GSG1Q2KHT4 349 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MOGAT2Q3SYC2 334 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SFRP4Q6FHJ7 346 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GLIPR1L1Q6UWM5 242 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 REEP6Q96HR9 211 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PRDM14Q9GZV8 571 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MOV10Q9HCE1 1003 aaKnown RBP15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 GHRLQ9UBU3 117 aa15.7■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PRAF2O60831 178 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PEX14O75381 377 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 LCATP04180 440 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 COX5BP10606 129 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZNF24P17028 368 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR3A4PP47883 348 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PMP22Q01453 160 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 UBE2V2Q15819 145 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 FAM189A2Q15884 450 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 DEFB109BQ30KR1 87 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZNF260Q3ZCT1 412 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZFP69Q49AA0 526 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PABPC1L2AQ5JQF8 200 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CRIP3Q6Q6R5 217 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NUFIP2Q7Z417 695 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RNF144BQ7Z419 303 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZNF100Q8IYN0 542 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 PNLDC1Q8NA58 520 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SEMA6DQ8NFY4 1073 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 OR4C16Q8NGL9 310 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 KCNG3Q8TAE7 436 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SPACA5Q96QH8 159 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NEK6Q9HC98 313 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 RANGRFQ9HD47 186 aaPredicted RBP15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MYEF2Q9P2K5 600 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 UPB1Q9UBR1 384 aa15.69■□□□□ 0.1
HLA-DQB1-201ENST00000374943 SLC22A20A6NK97 555 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 A8MV72 311 aaPredicted RBP15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NDUFB6O95139 128 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 CHRM2P08172 466 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MELTFP08582 738 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 AKAIN1P0CW23 69 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 NAT2P11245 290 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 AGTR1P30556 359 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MECP2P51608 486 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 KISS1Q15726 138 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ZNF101Q8IZC7 436 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TMEM229BQ8NBD8 167 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ACBD4Q8NC06 268 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 ITFG2Q969R8 447 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 C1QTNF5Q9BXJ0 243 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 MCUBQ9NWR8 336 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 KCNMB2Q9Y691 235 aa15.68■□□□□ 0.1
HLA-DQB1-201ENST00000374943 WIPF3A6NGB9 483 aa15.67■□□□□ 0.1
HLA-DQB1-201ENST00000374943 TGM6O95932 706 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms