RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SP9P0CG40 484 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 CD37P11049 281 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PGCP20142 388 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 EPHA8P29322 1005 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 CAPZBP47756 277 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 ID4P47928 161 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 F2RL1P55085 397 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 HABP2Q14520 560 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RPL7L1Q6DKI1 246 aaKnown RBP9.85□□□□□ -0.83
CCDC40-203ENST00000374877 COMMD2Q86X83 199 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM151BQ8IW70 566 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 ADAMTS17Q8TE56 1095 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 FBXO17Q96EF6 278 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 CYYR1Q96J86 154 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 PDE7BQ9NP56 450 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 RHBDD3Q9Y3P4 386 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 WIF1Q9Y5W5 379 aa9.85□□□□□ -0.83
CCDC40-203ENST00000374877 COLCA2A8K830 154 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 C1orf196B1AJZ1 125 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 AHSA1O95433 338 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 ISG15P05161 165 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 HOXB5P09067 269 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 CPT2P23786 658 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 PPT1P50897 306 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 LYPD6Q86Y78 171 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF248Q8NDW4 579 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 TSLPQ969D9 159 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM230Q96A57 120 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 OR10C1Q96KK4 312 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 TAF9BQ9HBM6 251 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SMCO4Q9NRQ5 59 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 FLVCR1Q9Y5Y0 555 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 PLPP3O14495 311 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SFT2D2O95562 160 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 BPNT1O95861 308 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SFTPBP07988 381 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 IL11P20809 199 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 HSD11B1P28845 292 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 CLDN6P56747 220 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 NUP54Q7Z3B4 507 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 RNF144BQ7Z419 303 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 MISPQ8IVT2 679 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 CARFQ8N187 725 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SLC25A45Q8N413 288 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SLC26A10Q8NG04 563 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 AKR1E2Q96JD6 320 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SLC46A1Q96NT5 459 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 CHRNA10Q9GZZ6 450 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 BANF2Q9H503 90 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 SOHLH2Q9NX45 425 aa9.84□□□□□ -0.83
CCDC40-203ENST00000374877 FABP1P07148 127 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 GIMD1P0DJR0 217 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 TBPP20226 339 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ABCD3P28288 659 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 NUBP1P53384 320 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ANKRD55Q3KP44 614 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 IGSF11Q5DX21 431 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 HLA-DQA1Q5Y7H0 255 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 EIF5AL1Q6IS14 154 aaKnown RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 KLHL24Q6TFL4 600 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 GPR119Q8TDV5 335 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ST7LQ8TDW4 575 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ADAMTS18Q8TE60 1221 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 PARP12Q9H0J9 701 aaKnown RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SEC61A2Q9H9S3 476 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 RAB18Q9NP72 206 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 TRAV20A0A0B4J274 112 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 BLACEA4D250 179 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 C9JQL5 133 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 TO15178 435 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SOCS1O15524 211 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 PTAFRP25105 342 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 CD1CP29017 333 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF93P35789 620 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SLC26A5P58743 744 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 NAA40Q86UY6 237 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 TMEM104Q8NE00 496 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 RAB3CQ96E17 227 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SAT2Q96F10 170 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 LOXL4Q96JB6 756 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SMIM8Q96KF7 97 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 NIT2Q9NQR4 276 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 GPR132Q9UNW8 380 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 IGKV1D-43A0A0B4J1Z2 117 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 FRG2CA6NGY1 282 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 RHPN2P1A8MT19 583 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 A8MVM7 634 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 NPIPA5E9PKD4 350 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 SDCBPO00560 298 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 TTRP02766 147 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 POLR2HP52434 150 aaKnown RBP9.83□□□□□ -0.84
CCDC40-203ENST00000374877 QRFPP83859 136 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 PLCXD2Q0VAA5 305 aa9.83□□□□□ -0.84
CCDC40-203ENST00000374877 ARFRP1Q13795 201 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms