RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FRRS1LQ9P0K9 344 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 LRBAP50851 2863 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 PDZD2O15018 2839 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 MYL12BO14950 172 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 RGS10O43665 173 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 DHRS3O75911 302 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-201ENST00000374673 CD55P08174 381 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 UBCP0CG48 685 aaKnown RBP12.78□□□□□ -0.36
HSPG2-201ENST00000374673 GABARAPL2P60520 117 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 IRF3Q14653 427 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 CCDC58Q4VC31 144 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 KRT74Q7RTS7 529 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 CSNK2A3Q8NEV1 391 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 OR13G1Q8NGZ3 307 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 SGCDQ92629 289 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 YTHDF1Q9BYJ9 559 aaKnown RBP12.78□□□□□ -0.36
HSPG2-201ENST00000374673 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 TMEM100Q9NV29 134 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 ERGIC3Q9Y282 383 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 LRRC42Q9Y546 428 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 CSMD2Q7Z408 3487 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 TANC2Q9HCD6 1990 aa12.78□□□□□ -0.36
HSPG2-201ENST00000374673 A0A1B0GTI1 187 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 E9PI62 339 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 P2RY10O00398 339 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 MLNRO43193 412 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 SPRY3O43610 288 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 MTRF1O75570 445 aaKnown RBP12.77□□□□□ -0.37
HSPG2-201ENST00000374673 ISG15P05161 165 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 ACKR3P25106 362 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 MAGEB1P43366 347 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 MAP2K3P46734 347 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 ART1P52961 327 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 WNT4P56705 351 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 ZBTB37Q5TC79 503 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 DOK3Q7L591 496 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 KLBQ86Z14 1044 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 FTMTQ8N4E7 242 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 GATAD2BQ8WXI9 593 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 FAM71F1Q96KD3 344 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-201ENST00000374673 TRIM36Q9NQ86 728 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 BABAM2Q9NXR7 383 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
HSPG2-201ENST00000374673 V9GYS6 101 aa12.77□□□□□ -0.37
HSPG2-201ENST00000374673 A0A1B0GVI7 797 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 OR4C45A6NMZ5 311 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 DHRS7CA6NNS2 312 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 ANKRD30BLA7E2S9 258 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 NCR1O76036 304 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 MT-ND2P03891 347 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 TNFSF4P23510 183 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 GTF2A1P52655 376 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-201ENST00000374673 CDK5R1Q15078 307 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 TSTQ16762 297 aaKnown RBP12.76□□□□□ -0.37
HSPG2-201ENST00000374673 ODF4Q2M2E3 257 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 XAF1Q6GPH4 301 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 RPL22L1Q6P5R6 122 aaKnown RBP12.76□□□□□ -0.37
HSPG2-201ENST00000374673 KRTAP1-3Q8IUG1 177 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 OR2Z1Q8NG97 314 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 OR14K1Q8NGZ2 314 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 ELMOD3Q96FG2 381 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 MYOZ1Q9NP98 299 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-201ENST00000374673 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 PRRC2AP48634 2157 aaKnown RBP12.76□□□□□ -0.37
HSPG2-201ENST00000374673 POLQO75417 2590 aa12.76□□□□□ -0.37
HSPG2-201ENST00000374673 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 LOC107986453A0A1B0GWG9 222 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 TMEM212A6NML5 194 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 H0YL77 283 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 ARID1AO14497 2285 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 OGG1O15527 345 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 SYT7O43581 403 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 GMDSO60547 372 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 MRPS14O60783 128 aaKnown RBP12.75□□□□□ -0.37
HSPG2-201ENST00000374673 LALBAP00709 142 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 CST4P01036 141 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 HPXP02790 462 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
HSPG2-201ENST00000374673 ZNF12P17014 697 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 ACHEP22303 614 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 CA6P23280 308 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
HSPG2-201ENST00000374673 TAS2R43P59537 309 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 CCL8P80075 99 aa12.75□□□□□ -0.37
HSPG2-201ENST00000374673 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-201ENST00000374673 RIPPLY1Q0D2K3 151 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms