RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PTAFRP25105 342 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ARNTP27540 789 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RPL12P30050 165 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 KCNJ3P48549 501 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RAB7AP51149 207 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 FABP9Q0Z7S8 132 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM97Q5BJF2 176 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM108Q6UXF1 575 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM64Q6YI46 380 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 MARVELD3Q96A59 401 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TECTBQ96PL2 329 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 DDOQ99489 341 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 C12orf57Q99622 126 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 WDR61Q9GZS3 305 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 NAA50Q9GZZ1 169 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GDF2Q9UK05 429 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SPTA1P02549 2419 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ARRDC5A6NEK1 342 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 B4E171 279 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 M0QYG6 137 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SLC31A2O15432 143 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SIX6O95475 246 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ORM1P02763 201 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 NTF3P20783 257 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TSPAN7P41732 249 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 NPY4RP50391 375 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ACER2Q5QJU3 275 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GLYATL3Q5SZD4 288 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CGB2Q6NT52 195 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 FAHD2BQ6P2I3 314 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CLEC14AQ86T13 490 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 PLPP6Q8IY26 295 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GABRG1Q8N1C3 465 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SLC38A9Q8NBW4 561 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 FAHD2AQ96GK7 314 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 C2orf50Q96LR7 162 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GNRHR2Q96P88 292 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 C7orf72A4D263 438 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SH2D7A6NKC9 451 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 P2RY10O00398 339 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ST8SIA5O15466 376 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 HSBP1O75506 76 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 PMP2P02689 132 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CYC1P08574 325 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ZP3P21754 424 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 PSMB5P28074 263 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CD81P60033 236 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 UBE2MP61081 183 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 HIST1H3AP68431 136 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 DUSP2Q05923 314 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 EXOSC7Q15024 291 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 IGFBP7Q16270 282 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 OR2T2Q6IF00 324 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RPUSD3Q6P087 351 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF813Q6ZN06 617 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 LHFPL2Q6ZUX7 228 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CMTM4Q8IZR5 234 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 OR51S1Q8NGJ8 323 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SLC38A5Q8WUX1 472 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SLC35B4Q969S0 331 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 UTP4Q969X6 686 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 NOL4LQ96MY1 436 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 JMJD8Q96S16 334 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SRRQ9GZT4 340 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 LHX3Q9UBR4 397 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SPAG17Q6Q759 2223 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RBBP6Q7Z6E9 1792 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 M0QZ24 198 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 DEGS1O15121 323 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ARPC3O15145 178 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GPX2P18283 190 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 FCGR2CP31995 323 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CD80P33681 288 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ADRA1AP35348 466 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 MRPL19P49406 292 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 RBP2P50120 134 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ELLP55199 621 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CLDN20P56880 219 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 PJVKQ0ZLH3 352 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CLEC9AQ6UXN8 241 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 DGAT2L6Q6ZPD8 337 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 LMNTD1Q8N9Z9 388 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 LKAAEAR1Q8TD35 194 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 TNFRSF13CQ96RJ3 184 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF346Q9UL40 294 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 URGCP-MRPS24S4R325 110 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 A0A1B0GWA3 101 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 A6NIN4 97 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 M0QZK8 103 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 PPM1DO15297 605 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 GGCTO75223 188 aaKnown RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 AQP8O94778 261 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 HPP00738 406 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF26P17031 533 aaPredicted RBP5.69□□□□□ -1.5
PTPN3-202ENST00000374541 CCR6P51684 374 aa5.69□□□□□ -1.5
PTPN3-202ENST00000374541 SLC35A2P78381 396 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms