RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OPN5Q6U736 354 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 HSD17B13Q7Z5P4 300 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF546Q86UE3 836 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 ANGPTL5Q86XS5 388 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF101Q8IZC7 436 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 AGBL5Q8NDL9 886 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 OR8B12Q8NGG6 310 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 OR5M9Q8NGP3 310 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
HMGCL-203ENST00000374490 PDCD10Q9BUL8 212 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 VSIG4Q9Y279 399 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF250P15622 560 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 NAT1P18440 290 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 ACP1P24666 158 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 CASRP41180 1078 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 GUCA1AP43080 201 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 CX3CR1P49238 355 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF121P58317 390 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 IL11RAQ14626 422 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 EXT1Q16394 746 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 C11orf87Q6NUJ2 197 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 OVCH2Q7RTZ1 564 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 ABHD12BQ7Z5M8 362 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 EIF4E3Q8N5X7 224 aaKnown RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 WBP1Q96G27 269 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 ZMAT3Q9HA38 289 aaKnown RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 MYEF2Q9P2K5 600 aaKnown RBP12.32□□□□□ -0.44
HMGCL-203ENST00000374490 FBXL2Q9UKC9 423 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
HMGCL-203ENST00000374490 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 KANTRA0A1W2PQU2 76 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 SULT2B1O00204 365 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 QDPRP09417 244 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 NUP62P37198 522 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-203ENST00000374490 CD96P40200 585 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-203ENST00000374490 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 TMPPEQ6ZT21 453 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 NAA40Q86UY6 237 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 OR5AS1Q8N127 324 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 ARRDC1Q8N5I2 433 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF283Q8N7M2 679 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
HMGCL-203ENST00000374490 OR4S1Q8NGB4 309 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 OR56B1Q8NGI3 324 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 PHYHIPLQ96FC7 376 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 MESP1Q9BRJ9 268 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-203ENST00000374490 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 PNRC2Q9NPJ4 139 aaKnown RBP12.31□□□□□ -0.44
HMGCL-203ENST00000374490 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 CACNA1GO43497 2377 aa12.31□□□□□ -0.44
HMGCL-203ENST00000374490 C9orf170A2RU37 121 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 BCL2L11O43521 198 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
HMGCL-203ENST00000374490 VAMP5O95183 116 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 APOC1P02654 83 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 CSN2P05814 226 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 MSR1P21757 451 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 THBS4P35443 961 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 PRKXP51817 358 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-203ENST00000374490 ARL6IP1Q15041 203 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 DBX2Q6ZNG2 339 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 CD163Q86VB7 1156 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 WDSUB1Q8N9V3 476 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
HMGCL-203ENST00000374490 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 CDC6Q99741 560 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 TMEM185BQ9H7F4 350 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 OCIAD1Q9NX40 245 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 ASH2LQ9UBL3 628 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 GLS2Q9UI32 602 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 TNFSF18Q9UNG2 199 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 SPEF1Q9Y4P9 236 aa12.3□□□□□ -0.44
HMGCL-203ENST00000374490 CHCHD2Q9Y6H1 151 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms