RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZNF217O75362 1048 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 C1QL1O75973 258 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 BTN3A2P78410 334 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 HYAL1Q12794 435 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 LFNGQ8NES3 379 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM208Q9BTX3 173 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 UBE2ZQ9H832 354 aaPredicted RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 ELOVL3Q9HB03 270 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 TLCD2A6NGC4 264 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 PI3P19957 117 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 DLK1P80370 383 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 SPOCK1Q08629 439 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 MTSS1LQ765P7 747 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 DTD1Q8TEA8 209 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 MRGPRX3Q96LB0 322 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 Q9N2J8 555 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 DNAJB12Q9NXW2 375 aaKnown RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 RAB22AQ9UL26 194 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 MEGF11A6BM72 1044 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 CEACAM18A8MTB9 384 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 M0R143 59 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 FSTP19883 344 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 PPP1CCP36873 323 aaKnown RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 GABRA4P48169 554 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 TDGF1P3P51864 188 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 OR4D6Q8NGJ1 314 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 ZNF461Q8TAF7 563 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 ERGIC1Q969X5 290 aa11.5□□□□□ -0.57
PRPF4-201ENST00000374198 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 SLC25A44Q96H78 314 aaPredicted RBP11.5□□□□□ -0.57
PRPF4-201ENST00000374198 SPTBP11277 2137 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 A0A1B0GV50 99 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 DEDDO75618 318 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 PNPP00491 289 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 OR5H8P0DN80 308 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 GNB3P16520 340 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 GLIPR1P48060 266 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 CLDN6P56747 220 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 GAGE1Q13065 139 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 CDRT4Q8N9R6 151 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 FAM46BQ96A09 425 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 ANKRD9Q96BM1 317 aaPredicted RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 NUS1Q96E22 293 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 PRRX2Q99811 253 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 RTBDNQ9BSG5 229 aaPredicted RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 H7C1C5 153 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 HSD17B6O14756 317 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 SERPINA2P20848 420 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 GABRA3P34903 492 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 AFF3P51826 1226 aaKnown RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 LCN6P62502 163 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 SLC17A1Q14916 467 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 MEP1BQ16820 701 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 FCRL6Q6DN72 434 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM184AQ6ZMB5 413 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 PARS2Q7L3T8 475 aaKnown RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 SNIP1Q8TAD8 396 aaKnown RBP11.49□□□□□ -0.57
PRPF4-201ENST00000374198 FAM210BQ96KR6 192 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 SNX22Q96L94 193 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 COLEC10Q9Y6Z7 277 aa11.49□□□□□ -0.57
PRPF4-201ENST00000374198 H0YL77 283 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 LINC01565O15544 149 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ABLIM3O94929 683 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 AMBPP02760 352 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 NPSP0C0P6 89 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 LINC00614P0C842 121 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 GPR18Q14330 331 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 GRASPQ7Z6J2 395 aaPredicted RBP11.48□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM183AQ8IXX5 376 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 MRPL43Q8N983 215 aaKnown RBP11.48□□□□□ -0.57
PRPF4-201ENST00000374198 METTL21AQ8WXB1 218 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 OR2M4Q96R27 311 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ZBP1Q9H171 429 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 SPHK2Q9NRA0 654 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 BRWD1Q9NSI6 2320 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 A0A0C4DFX4 3053 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 BORCS7-ASMTA0A0B4J1R7 106 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 MED19A0JLT2 244 aaPredicted RBP11.48□□□□□ -0.57
PRPF4-201ENST00000374198 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 GJA4P35212 333 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 TSPAN7P41732 249 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 CTXN1P60606 82 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 IAH1Q2TAA2 248 aaPredicted RBP11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 DCAF10Q5QP82 559 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ADIPOR2Q86V24 386 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 RAB42Q8N4Z0 105 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms