RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 MED19A0JLT2 244 aaPredicted RBP15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 H7C2Y5 167 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 PDGFBP01127 241 aaPredicted RBP15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 EIF5AL1Q6IS14 154 aaKnown RBP15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TMEM88Q6PEY1 159 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ASB10Q8WXI3 467 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ZFP64Q9NPA5 681 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 MCRIP1C9JLW8 97 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TSPAN2O60636 221 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 UBBP0CG47 229 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 GGTLC2Q14390 218 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ZNF169Q14929 603 aaPredicted RBP15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 DCAF12Q5T6F0 453 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 SCARB1Q8WTV0 552 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 THOC3Q96J01 351 aaKnown RBP15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 RAMP1O60894 148 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TRIOO75962 3097 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 C6orf201Q7Z4U5 140 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TMEM200AQ86VY9 491 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 OR8B12Q8NGG6 310 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ZNF426Q9BUY5 554 aa15.72■□□□□ 0.11
TRAF3IP1-201ENST00000373327 SNRPGP15A8MWD9 76 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 SSX5O60225 188 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 CCL3P10147 92 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 RAB6AP20340 208 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 MSX1P28360 303 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 RGS19P49795 217 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 LAMTOR1Q6IAA8 161 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ZNF2Q9BSG1 426 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 PLA2G3Q9NZ20 509 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 DHHO43323 396 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 DIRAS3O95661 229 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 APOC1P02654 83 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 EPHA8P29322 1005 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 RIN1Q13671 783 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 PLXDC2Q6UX71 529 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TMPPEQ6ZT21 453 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 BEND4Q6ZU67 534 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 HSD17B11Q8NBQ5 300 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 LIPT2A6NK58 231 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 MED6O75586 246 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 ZNF44P15621 663 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 CXCL2P19875 107 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 HOXC12P31275 282 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 CLEC9AQ6UXN8 241 aa15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 NOSIPQ9Y314 301 aaKnown RBP15.71■□□□□ 0.11
TRAF3IP1-201ENST00000373327 TPT1P13693 172 aaKnown RBP15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 GLRA1P23415 457 aa15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 BTCP35070 178 aa15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 SLAMF9Q96A28 289 aa15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 METTL9Q9H1A3 318 aa15.71■□□□□ 0.1
TRAF3IP1-201ENST00000373327 KIF26AQ9ULI4 1882 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 IGHV5-10-1A0A0J9YXX1 117 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 A0A1W2PR77 199 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 RPS4XP62701 263 aaKnown RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 DOK3Q7L591 496 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CATSPERDQ86XM0 798 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TMEM104Q8NE00 496 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ADAM19Q9H013 955 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 B4GALT7Q9UBV7 327 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 GJE1A6NN92 205 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 J3QRE1 110 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 PET100P0DJ07 73 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CPT2P23786 658 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 EIF5AP63241 154 aaKnown RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 STK11Q15831 433 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ATPAF1Q5TC12 328 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TRILQ7L0X0 811 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 PIGQQ9BRB3 760 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 NMNAT2Q9BZQ4 307 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 SLCO5A1Q9H2Y9 848 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 XRCC2O43543 280 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 GSTZ1O43708 216 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 IGKV3-11P04433 115 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 OR8U9P0C7N5 309 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CLINT1Q14677 625 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ZNF774Q6NX45 483 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ZSCAN1Q8NBB4 408 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TTC9Q92623 222 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ZNF385AQ96PM9 386 aaKnown RBP15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TIMP4Q99727 224 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 OPN4Q9UHM6 478 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TANC1Q9C0D5 1861 aa15.7■□□□□ 0.1
TRAF3IP1-201ENST00000373327 OR2M5A3KFT3 312 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 MPC2O95563 127 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ABHD16AO95870 558 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 KLK2P20151 261 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 PVALBP20472 110 aaPredicted RBP15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 GALNSP34059 522 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CYB561P49447 251 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 TAS2R31P59538 309 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CYCSP99999 105 aaKnown RBP15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 CEACAM16Q2WEN9 425 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 OR5AS1Q8N127 324 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 LIPHQ8WWY8 451 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 A0A0D9SG52 128 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 SCGNO76038 276 aa15.69■□□□□ 0.1
TRAF3IP1-201ENST00000373327 ASCL1P50553 236 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms