RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MARCH1Q8TCQ1 289 aa20.95■□□□□ 0.94
CDK9-201ENST00000373264 MOB1AQ9H8S9 216 aa20.95■□□□□ 0.94
CDK9-201ENST00000373264 OR5H14A6NHG9 310 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 RFPL4AA6NLU0 287 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 RFPL4AL1F8VTS6 287 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 ERCC1P07992 297 aaPredicted RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 ZFP36L1Q07352 338 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 MEF2DQ14814 521 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 ZNF239Q16600 458 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 YRDCQ86U90 279 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 SLC25A42Q86VD7 318 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 ZIC4Q8N9L1 334 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 PRRT1Q99946 306 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 GPR179Q6PRD1 2367 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 PI3P19957 117 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 CAPZA1P52907 286 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 CCDC157Q569K6 752 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 TMEM65Q6PI78 240 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 KCTD9Q7L273 389 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 ZNF546Q86UE3 836 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 OR9K2Q8NGE7 335 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 RBPMSQ93062 196 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 RAB3CQ96E17 227 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 PDCD10Q9BUL8 212 aa20.94■□□□□ 0.94
CDK9-201ENST00000373264 NXT1Q9UKK6 140 aaKnown RBP20.94■□□□□ 0.94
CDK9-201ENST00000373264 NSG1A0A0A6YYJ2 146 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 C9orf170A2RU37 121 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 NPIPA2E9PIF3 369 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 NPIPA3F8WFD2 350 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 MSR1P21757 451 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 ATP1B3P54709 279 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 SIGIRRQ6IA17 410 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 TMEM123Q8N131 208 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 OR2Y1Q8NGV0 311 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 OR4K15Q8NH41 348 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 PAQR8Q8TEZ7 354 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 TMEM59Q9BXS4 323 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 SLC2A8Q9NY64 477 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 C9J4A7 227 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 C4BPBP20851 252 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 MPGP29372 298 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 UBE2V2Q15819 145 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 TCEAL6Q6IPX3 200 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 LYG2Q86SG7 212 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 WDR5BQ86VZ2 330 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 FAM219AQ8IW50 185 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 SUN5Q8TC36 379 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 TCEAL3Q969E4 200 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 SH2D2AQ9NP31 389 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 HPF1Q9NWY4 346 aa20.93■□□□□ 0.94
CDK9-201ENST00000373264 LOC102725191A0A1B0GVB3 256 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 LGALS8O00214 317 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 CCL1P22362 96 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 IL13RA1P78552 427 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 Q0VFX4 171 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 FAM74A1Q5RGS3 127 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 RGS7BPQ6MZT1 257 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 DOK3Q7L591 496 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 FBXO17Q96EF6 278 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 LINC00052Q96N35 136 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 GUCD1Q96NT3 240 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 NELFAQ9H3P2 528 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 SDHAF2Q9NX18 166 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 ZNF107Q9UII5 783 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 ARID1AO14497 2285 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 AHCTF1Q8WYP5 2266 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 TLX3O43711 291 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 PATE4P0C8F1 98 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 DSCR4P56555 118 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 GMFBP60983 142 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 BAMBIQ13145 260 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 GK2Q14410 553 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 TMEM54Q969K7 222 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 PIGTQ969N2 578 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 MYOZ1Q9NP98 299 aaPredicted RBP20.92■□□□□ 0.94
CDK9-201ENST00000373264 SLC39A1Q9NY26 324 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 KIF25Q9UIL4 384 aa20.92■□□□□ 0.94
CDK9-201ENST00000373264 NCOR1O75376 2440 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 FRYQ5TBA9 3013 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 hCG_1807616A0A1W2PRN6 198 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 B3GALNT1O75752 331 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 RFPL3SP0C7P2 107 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 HIST1H1DP16402 221 aaKnown RBP20.91■□□□□ 0.94
CDK9-201ENST00000373264 NPY4RP50391 375 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 KISS1Q15726 138 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 EXT1Q16394 746 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 SNAI3Q3KNW1 292 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 HDDC2Q7Z4H3 204 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 UBALD2Q8IYN6 164 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 SSC4DQ8WTU2 575 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 PPP1R1CQ8WVI7 109 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 KCNMB2Q9Y691 235 aa20.91■□□□□ 0.94
CDK9-201ENST00000373264 CCDC163A0A0D9SF12 145 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 STMND1H3BQB6 276 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 EFSO43281 561 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 IFNA6P05013 189 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 RPA2P15927 270 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 OTX2P32243 289 aa20.9■□□□□ 0.94
CDK9-201ENST00000373264 STARP49675 285 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms