RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 POM121L2Q96KW2 1035 aa15.22■□□□□ 0.03
SSBP3-203ENST00000371319 SPACA5Q96QH8 159 aa15.22■□□□□ 0.03
SSBP3-203ENST00000371319 RBFOX1Q9NWB1 397 aaKnown RBP15.22■□□□□ 0.03
SSBP3-203ENST00000371319 ZNF391Q9UJN7 358 aa15.22■□□□□ 0.03
SSBP3-203ENST00000371319 hCG_38984A0A1B0GV85 526 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MBD3L4A6NDZ8 208 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MBD3L3A6NE82 208 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 GGT3PA6NGU5 568 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MBD3L5A6NJ08 208 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 GABARAPH6UMI1 98 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 XRCC2O43543 280 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 HCKP08631 526 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 PTHLHP12272 177 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 RAB6AP20340 208 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 STOMP27105 288 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 SRP9P49458 86 aaKnown RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 ZNF92Q03936 586 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 GPR176Q14439 515 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 OR10K2Q6IF99 312 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MZT2BQ6NZ67 158 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 CADM3Q8N126 398 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 PAQR4Q8N4S7 273 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 OR52I2Q8NH67 350 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MBD3L2Q8NHZ7 208 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 ZNF75AQ96N20 296 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 ATG5Q9H1Y0 275 aa15.21■□□□□ 0.03
SSBP3-203ENST00000371319 MYEF2Q9P2K5 600 aaKnown RBP15.21■□□□□ 0.03
SSBP3-203ENST00000371319 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.02
SSBP3-203ENST00000371319 C5orf49A4QMS7 147 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 CNOT4O95628 575 aaKnown RBP15.2■□□□□ 0.02
SSBP3-203ENST00000371319 VSIG8P0DPA2 414 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 CCL2P13500 99 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 OR3A4PP47883 348 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 GSK3AP49840 483 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 FAM3AP98173 230 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 RIPPLY1Q0D2K3 151 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 UNC119Q13432 240 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 FAM180AQ6UWF9 173 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 DNM1P46Q6ZS02 220 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 Q6ZT83 130 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 ANGPTL5Q86XS5 388 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 C15orf40Q8WUR7 153 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 NANOS1Q8WY41 292 aaKnown RBP15.2■□□□□ 0.02
SSBP3-203ENST00000371319 AKAP1Q92667 903 aaKnown RBP eCLIP15.2■□□□□ 0.02
SSBP3-203ENST00000371319 C1orf147Q96MC9 270 aaPredicted RBP15.2■□□□□ 0.02
SSBP3-203ENST00000371319 MMP28Q9H239 520 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 DIABLOQ9NR28 239 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 FBLN5Q9UBX5 448 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 RAB22AQ9UL26 194 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 RAXQ9Y2V3 346 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 RTTNQ86VV8 2226 aa15.2■□□□□ 0.02
SSBP3-203ENST00000371319 ORC5O43913 435 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TNFSF13O75888 250 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 GDNFP39905 211 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 PRSS12P56730 875 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 MRPS10P82664 201 aaKnown RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 PLP2Q04941 152 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 PMPCAQ10713 525 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 KLF9Q13886 244 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 OR8B8Q15620 311 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 GSG1Q2KHT4 349 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 KRTCAP3Q53RY4 240 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 MDP1Q86V88 176 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 GLCCI1Q86VQ1 547 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 Q8NA96 180 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 PLSCR4Q9NRQ2 329 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 GPR173Q9NS66 373 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 MRPS28Q9Y2Q9 187 aaKnown RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 RBMX2Q9Y388 322 aaKnown RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 FAM215AQ9Y5M1 114 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 CACNG2Q9Y698 323 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 APC2O95996 2303 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TRAV18A0A075B6X5 111 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TMEM14DPA8MWL7 114 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TOXO94900 526 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 CGAP01215 116 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 COX5AP20674 150 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 CCNOP22674 350 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 BTCP35070 178 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 SF3B4Q15427 424 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■■ 27.4
SSBP3-203ENST00000371319 GABRA6Q16445 453 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 DMRTC1Q5HYR2 192 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 C1orf185Q5T7R7 199 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TMEM42Q69YG0 159 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 AWAT2Q6E213 333 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 GLIPR1L1Q6UWM5 242 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 TOMM5Q8N4H5 51 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 DUSP18Q8NEJ0 188 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 ENKURQ8TC29 256 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 SNRNP27Q8WVK2 155 aaKnown RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 FCAMRQ8WWV6 532 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 ITPKCQ96DU7 683 aa15.19■□□□□ 0.02
SSBP3-203ENST00000371319 ZNF71Q9NQZ8 489 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-203ENST00000371319 MEIOCA2RUB1 952 aa15.18■□□□□ 0.02
SSBP3-203ENST00000371319 WDR1O75083 606 aa15.18■□□□□ 0.02
SSBP3-203ENST00000371319 RAD51DO75771 328 aa15.18■□□□□ 0.02
SSBP3-203ENST00000371319 LYZL6O75951 148 aa15.18■□□□□ 0.02
SSBP3-203ENST00000371319 TPOP07202 933 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms