RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 H2AFB1P0C5Y9 115 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 PI3P19957 117 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 THBS3P49746 956 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 AKR1C1Q04828 323 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GREB1LQ9C091 1923 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GP1BAP07359 652 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GLI4P10075 376 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 HOXA1P49639 335 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 PPP1CAP62136 330 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GUSBP11Q6P575 273 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ANKRD37Q7Z713 158 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 OR10G3Q8NGC4 313 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 MOGAT1Q96PD6 335 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 TAAR9Q96RI9 348 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 IER2Q9BTL4 223 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 DEFB127Q9H1M4 99 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 PLSCR3Q9NRY6 295 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ICAM5Q9UMF0 924 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ZFC3H1O60293 1989 aaKnown RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 NKX6-3A6NJ46 265 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GREM1O60565 184 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ARL3P36405 182 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 CDH26Q8IXH8 852 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 OR1F12Q8NHA8 337 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 SFT2D1Q8WV19 159 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 APOBEC3DQ96AK3 386 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 MRPS18AQ9NVS2 196 aaKnown RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 STRAPQ9Y3F4 350 aaKnown RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A096LPE4 126 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 hCG_1809904A0A1W2PP81 198 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1W2PPE2 198 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1W2PPZ6 126 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1W2PR64 198 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1W2PRV1 198 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 MBTPS2O43462 519 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 EPHA8P29322 1005 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 S100A7P31151 101 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 EIF3IQ13347 325 aaKnown RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 OR5AS1Q8N127 324 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 ABHD1Q96SE0 405 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 FLRT3Q9NZU0 649 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 TIMM8BQ9Y5J9 83 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 SPAG17Q6Q759 2223 aa10.63□□□□□ -0.71
DEPDC1-201ENST00000370966 MEIKINA0A087WXM9 373 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CCDC187A0A096LP49 1063 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 RFPL4AA6NLU0 287 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 RFPL4AL1F8VTS6 287 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 PLPP3O14495 311 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CELA2BP08218 269 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CDAP32320 146 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 FMODQ06828 376 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 RAB35Q15286 201 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 TMEM268Q5VZI3 342 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ATG4DQ86TL0 474 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 DEFB123Q8N688 67 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 OR4D9Q8NGE8 314 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ST7LQ8TDW4 575 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ST8SIA2Q92186 375 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 PTP4A1Q93096 173 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 NRTNQ99748 197 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 EGLN1Q9GZT9 426 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ARV1Q9H2C2 271 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 UCK1Q9HA47 277 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 U3KQ87 197 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 PLXNB2O15031 1838 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 LRP3O75074 770 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 WDR1O75083 606 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 WNT1P04628 370 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CTLA4P16410 223 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 PSMB3P49720 205 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 UBE2IP63279 158 aaKnown RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 COL11A1P12107 1806 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 IL2RAP01589 272 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CRYAAP02489 173 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ADRB1P08588 477 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 NFYBP25208 207 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 SLC6A1P30531 599 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 HAAOP46952 286 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 PIGPP57054 158 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 DHODHQ02127 395 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ROBO4Q8WZ75 1007 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 FAM173AQ9BQD7 235 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 GFOD1Q9NXC2 390 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 ZNF354AO60765 605 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 CTAG2O75638 210 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 HLA-HP01893 362 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 FUT3P21217 361 aa10.62□□□□□ -0.71
DEPDC1-201ENST00000370966 IL3RAP26951 378 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms