RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 FAM71F1Q96KD3 344 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-204ENST00000370496 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 COX4I2Q96KJ9 171 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 SIGLEC11Q96RL6 698 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 PAPOLGQ9BWT3 736 aaKnown RBP12.59□□□□□ -0.39
COL9A1-204ENST00000370496 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 BPESC1Q9GZL8 116 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 DLL4Q9NR61 685 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF275Q9NSD4 429 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-204ENST00000370496 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-204ENST00000370496 CLDN25C9JDP6 229 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 F5H5P2 479 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 H0YL77 283 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 TTRP02766 147 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 MYL12AP19105 171 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 VHLP40337 213 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 CRYBB2P43320 205 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 GALEQ14376 348 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 LHFPL3Q86UP9 236 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 CIARTQ8N365 385 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-204ENST00000370496 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 LYZL4Q96KX0 146 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 G6PC2Q9NQR9 355 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 GPR84Q9NQS5 396 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 ERVK13-1Q9NX77 482 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 TREM2Q9NZC2 230 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 CACNG2Q9Y698 323 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF469Q96JG9 3925 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-204ENST00000370496 F8P00451 2351 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 CR1P17927 2039 aa12.58□□□□□ -0.4
COL9A1-204ENST00000370496 J3QLW9 94 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 PPIHO43447 177 aaKnown RBP12.57□□□□□ -0.4
COL9A1-204ENST00000370496 RP2O75695 350 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 INHBBP09529 407 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF19P17023 458 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 COL8A2P25067 703 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 GIFP27352 417 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 PSMB10P40306 273 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 NR4A2P43354 598 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 GPR6P46095 362 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-204ENST00000370496 OR12D2P58182 307 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 MED21Q13503 144 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 ODF4Q2M2E3 257 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 KCTD20Q7Z5Y7 419 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 CATSPERDQ86XM0 798 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 ELMOD2Q8IZ81 293 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 OR8S1Q8NH09 359 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 CCL17Q92583 94 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 RORBQ92753 470 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 TIMD4Q96H15 378 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-204ENST00000370496 MRPS18AQ9NVS2 196 aaKnown RBP12.57□□□□□ -0.4
COL9A1-204ENST00000370496 PPP1R3CQ9UQK1 317 aa12.57□□□□□ -0.4
COL9A1-204ENST00000370496 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 A0A1B0GVI7 797 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 A0A1B0GWJ7 208 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ANXA2P2A6NMY6 339 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 P2RY10O00398 339 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 GMDSO60547 372 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 MTRF1O75570 445 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 HTR1AP08908 422 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 UBCP0CG48 685 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ACKR3P25106 362 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 DCKP27707 260 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 MAP2K3P46734 347 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 RIN1Q13671 783 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 WDR38Q5JTN6 314 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 KLBQ86Z14 1044 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 SYS1Q8N2H4 156 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 BPIFB6Q8NFQ5 453 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 SEMA6DQ8NFY4 1073 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 FBLIM1Q8WUP2 373 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 SOX7Q9BT81 388 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ANKRD60Q9BZ19 345 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 PLEKHA1Q9HB21 404 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 SLC22A13Q9Y226 551 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 HIVEP1P15822 2718 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ZNF816-ZNF321PA0A0X1KG74 233 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 VWC2LB2RUY7 222 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 XPNPEP2O43895 674 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 DHRS3O75911 302 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 PIPP12273 146 aaPredicted RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 ATP6V1B1P15313 513 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 FOSL1P15407 271 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 USF1P22415 310 aaPredicted RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 CD200P41217 278 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 AHSA2Q719I0 299 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
COL9A1-204ENST00000370496 MOGAT3Q86VF5 341 aa12.56□□□□□ -0.4
COL9A1-204ENST00000370496 CELF2-AS1Q8N7Q2 184 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms