RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ARPINQ7Z6K5 226 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 RNF113BQ8IZP6 322 aaKnown RBP12.55□□□□□ -0.4
SSR4-204ENST00000370087 OR6V1Q8N148 313 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 PLPP7Q8NBV4 271 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 MAP6Q96JE9 813 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 MYLK2Q9H1R3 596 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
SSR4-204ENST00000370087 K7EIL1 84 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 MPIG6BO95866 241 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 TXNDC12O95881 172 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 IFNW1P05000 195 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 CD28P10747 220 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 MNAT1P51948 309 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 CSNK2BP67870 215 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 IKZF1Q13422 519 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 ZBTB37Q5TC79 503 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 CCBE1Q6UXH8 406 aaPredicted RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 LNX2Q8N448 690 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 BEND2Q8NDZ0 799 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 OR56B2PQ8NGI1 322 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 LRRC29Q8WV35 223 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 RSRC1Q96IZ7 334 aaKnown RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 FN3KQ9H479 309 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 PPP1R3EQ9H7J1 279 aa12.54□□□□□ -0.4
SSR4-204ENST00000370087 SRA1Q9HD15 236 aaKnown RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 PRPF19Q9UMS4 504 aaKnown RBP12.54□□□□□ -0.4
SSR4-204ENST00000370087 GGT3PA6NGU5 568 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 M0R135 149 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 IFNA8P32881 189 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 RPS27P42677 84 aaKnown RBP12.53□□□□□ -0.4
SSR4-204ENST00000370087 OMPP47874 163 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 RFX4Q33E94 735 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 PGM2L1Q6PCE3 622 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 RCN3Q96D15 328 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 ZNF799Q96GE5 643 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 SSX3Q99909 188 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
SSR4-204ENST00000370087 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
SSR4-204ENST00000370087 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
SSR4-204ENST00000370087 CYB5R1Q9UHQ9 305 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 AURKCQ9UQB9 309 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
SSR4-204ENST00000370087 MAB21L2Q9Y586 359 aa12.53□□□□□ -0.4
SSR4-204ENST00000370087 XPNPEP2O43895 674 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 CRABP1P29762 137 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 NUDT2P50583 147 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 UBE2E1P51965 193 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 ECH1Q13011 328 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 WDR82Q6UXN9 313 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 CMTM4Q8IZR5 234 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 OR2T12Q8NG77 320 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 OR2T6Q8NHC8 308 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 H1FXQ92522 213 aaKnown RBP12.52□□□□□ -0.41
SSR4-204ENST00000370087 NMNAT3Q96T66 252 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 NDE1Q9NXR1 346 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 TMEM5Q9Y2B1 443 aa12.52□□□□□ -0.41
SSR4-204ENST00000370087 DYNC2H1Q8NCM8 4307 aaKnown RBP12.51□□□□□ -0.41
SSR4-204ENST00000370087 RYR2Q92736 4967 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 FBXO24O75426 580 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 SLC2A1P11166 492 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 IGLL1P15814 213 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 TGM4P49221 684 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 TPTEP56180 551 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 SEC23BQ15437 767 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 MICBQ29980 383 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 STUMQ69YW2 141 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 C11orf88Q6PI97 169 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 DNM1P34Q6PK57 102 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 DPY19L2P2Q6ZN68 376 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 SPERTQ8NA61 448 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 OR4S1Q8NGB4 309 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 OR5T2Q8NGG2 359 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
SSR4-204ENST00000370087 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 R3HDM4Q96D70 268 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 CLPTM1LQ96KA5 538 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
SSR4-204ENST00000370087 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
SSR4-204ENST00000370087 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 RPRD1BQ9NQG5 326 aaKnown RBP12.51□□□□□ -0.41
SSR4-204ENST00000370087 SERTAD4Q9NUC0 356 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
SSR4-204ENST00000370087 BHLHE40O14503 412 aa12.5□□□□□ -0.41
SSR4-204ENST00000370087 NDUFB3O43676 98 aa12.5□□□□□ -0.41
SSR4-204ENST00000370087 ZNF682O95780 498 aa12.5□□□□□ -0.41
SSR4-204ENST00000370087 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
SSR4-204ENST00000370087 OTX1P32242 354 aaPredicted RBP12.5□□□□□ -0.41
SSR4-204ENST00000370087 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms