RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 THBS2P35442 1172 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 ETV6P41212 452 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 CCR9P51686 369 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 PRKXP51817 358 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 PPP3R1P63098 170 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 ENDOGQ14249 297 aaKnown RBP8.64□□□□□ -1.03
TPM3-210ENST00000368530 KCNMB1Q16558 191 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 CEP78Q5JTW2 689 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 HES5Q5TA89 166 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 FAM131AQ6UXB0 335 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 BEND4Q6ZU67 534 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 LINGO2Q7L985 606 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 GABRG1Q8N1C3 465 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 DTX3Q8N9I9 347 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
TPM3-210ENST00000368530 NABP1Q96AH0 204 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 WDFY2Q96P53 400 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 GFI1Q99684 422 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 REG4Q9BYZ8 158 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 ACTR6Q9GZN1 396 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 SLITRK2Q9H156 845 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 NELFAQ9H3P2 528 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 CRLF2Q9HC73 371 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 TCF7L1Q9HCS4 588 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 G6PC2Q9NQR9 355 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 C14orf119Q9NWQ9 140 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 MCTS1Q9ULC4 181 aaKnown RBP8.64□□□□□ -1.03
TPM3-210ENST00000368530 LAMP3Q9UQV4 416 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 NOSIPQ9Y314 301 aaKnown RBP8.64□□□□□ -1.03
TPM3-210ENST00000368530 V9GYH0 126 aa8.64□□□□□ -1.03
TPM3-210ENST00000368530 TRBV5-7A0A0A0MS05 114 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 FABP12A6NFH5 140 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 ZNF878C9JN71 531 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 PDCD5O14737 125 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 MRPL33O75394 65 aaKnown RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 KRT33AO76009 404 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 PAHP00439 452 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 MAS1P04201 325 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 SLC2A1P11166 492 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 ATF1P18846 271 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 CFL1P23528 166 aaKnown RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 AGTR1P30556 359 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 ZNF133P52736 654 aaPredicted RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 CLEC12BQ2HXU8 276 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 RGS21Q2M5E4 152 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 NCMAPQ5T1S8 102 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 CNIH2Q6PI25 160 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 DEGS2Q6QHC5 323 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 FOXL2NBQ6ZUU3 175 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 WFDC8Q8IUA0 241 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 TUSC5Q8IXB3 177 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 SAMD12Q8N8I0 201 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 DNAAF1Q8NEP3 725 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 TRMT10AQ8TBZ6 339 aaKnown RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
TPM3-210ENST00000368530 ACOT12Q8WYK0 555 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 PHYHIPQ92561 330 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 NEUROG1Q92886 237 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 TMEM106AQ96A25 262 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 GLRX2Q9NS18 164 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 DHDHQ9UQ10 334 aa8.63□□□□□ -1.03
TPM3-210ENST00000368530 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 IGKV3D-15A0A087WSY6 115 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 LOC107986453A0A1B0GWG9 222 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 A6NIN4 97 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 LMX1BO60663 402 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 NDUFS7O75251 213 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 EIF4EP06730 217 aaKnown RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 B4GALT1P15291 398 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 ELK1P19419 428 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 LSM6P62312 80 aaKnown RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 GALK2Q01415 458 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 TSC22D1Q15714 1073 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 TAB1Q15750 504 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 ZNF79Q15937 498 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 CEACAM16Q2WEN9 425 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 PYDC2Q56P42 97 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 TSPO2Q5TGU0 170 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 C9orf135Q5VTT2 229 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 STEAP3Q658P3 488 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 NUFIP2Q7Z417 695 aaKnown RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 ZNF283Q8N7M2 679 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 OR13C3Q8NGS6 347 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 OR5H6Q8NGV6 325 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 ZNF671Q8TAW3 534 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 TMEM45BQ96B21 275 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 S100PBPQ96BU1 408 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 PBOV1Q9GZY1 135 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 SLCO5A1Q9H2Y9 848 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 GPR35Q9HC97 309 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 PNRC2Q9NPJ4 139 aaKnown RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 FAM206AQ9NX38 181 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 PAQR5Q9NXK6 330 aaPredicted RBP8.62□□□□□ -1.03
TPM3-210ENST00000368530 EMC3Q9P0I2 261 aa8.62□□□□□ -1.03
TPM3-210ENST00000368530 ADAM30Q9UKF2 790 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms