RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 NPIPA7E9PJI5 369 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 NUDT21O43809 227 aaKnown RBP11.69□□□□□ -0.54
NCSTN-202ENST00000368063 DBIP07108 87 aaKnown RBP11.69□□□□□ -0.54
NCSTN-202ENST00000368063 NPIPA8P0DM63 369 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 FOLR1P15328 257 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CD52P31358 61 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PPM1AP35813 382 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 TM4SF4P48230 202 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PRPS1P60891 318 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CCL20P78556 96 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 FOXF1Q12946 379 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 ENPP2Q13822 863 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 TMEM225Q6GV28 225 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 SLC25A26Q70HW3 274 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 SLC16A14Q7RTX9 510 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PCSK9Q8NBP7 692 aaKnown RBP11.69□□□□□ -0.54
NCSTN-202ENST00000368063 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 OR1N1Q8NGS0 311 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 THRSPQ92748 146 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CMKLR1Q99788 373 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PRRX2Q99811 253 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CLEC4EQ9ULY5 219 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 MEMO1Q9Y316 297 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CHRM2P08172 466 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 CST2P09228 141 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 GIMD1P0DJR0 217 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PSMB5P28074 263 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 ETFRF1Q6IPR1 90 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 DPY19L2P2Q6ZN68 376 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 SLC35E3Q7Z769 313 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 ZNF619Q8N2I2 560 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 DKKL1Q9UK85 242 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 PADI3Q9ULW8 664 aa11.69□□□□□ -0.54
NCSTN-202ENST00000368063 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 ARPC3O15145 178 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 FGF5P12034 268 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 P2RY1P47900 373 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 LMAN2Q12907 356 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 METRNLQ641Q3 311 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 COX18Q8N8Q8 333 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 TSSK2Q96PF2 358 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 LRFN1Q9P244 771 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 TRBV24-1A0A075B6N3 115 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 GRM6O15303 877 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 AGR2O95994 175 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 CD82P27701 267 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 RPL4P36578 427 aaKnown RBP11.68□□□□□ -0.54
NCSTN-202ENST00000368063 RND3P61587 244 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 COL10A1Q03692 680 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 C22orf39Q6P5X5 142 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 KIRREL2Q6UWL6 708 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 LINC01555Q8NAE3 123 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 OR52N4Q8NGI2 321 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 PTX4Q96A99 478 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 RTBDNQ9BSG5 229 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-202ENST00000368063 DNAJC4Q9NNZ3 241 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 DIRAS3O95661 229 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 STATHP02808 62 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 IGFBP3P17936 291 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-202ENST00000368063 PI3P19957 117 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-202ENST00000368063 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-202ENST00000368063 MMP16P51512 607 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 GXYLT1Q4G148 440 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 CSNK1A1LQ8N752 337 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 FBXO34Q9NWN3 711 aa11.68□□□□□ -0.54
NCSTN-202ENST00000368063 TCRBV21S2A2A0A5A6 115 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 CD70P32970 193 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 CDKN2AP42771 156 aaKnown RBP11.67□□□□□ -0.54
NCSTN-202ENST00000368063 PDLIM4P50479 330 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 CEBPGP53567 150 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 SLC37A1P57057 533 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 OR5AR1Q8NGP9 310 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 TAS2R4Q9NYW5 299 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 RHBDD3Q9Y3P4 386 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 ETV2O00321 342 aaPredicted RBP11.67□□□□□ -0.54
NCSTN-202ENST00000368063 PQBP1O60828 265 aaKnown RBP11.67□□□□□ -0.54
NCSTN-202ENST00000368063 ERGP11308 486 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 ARL14EPQ8N8R7 260 aaPredicted RBP11.67□□□□□ -0.54
NCSTN-202ENST00000368063 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
NCSTN-202ENST00000368063 NKD1Q969G9 470 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 GPR173Q9NS66 373 aa11.67□□□□□ -0.54
NCSTN-202ENST00000368063 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
NCSTN-202ENST00000368063 CLEC3AO75596 197 aa11.66□□□□□ -0.54
NCSTN-202ENST00000368063 HIST1H1TP22492 207 aaPredicted RBP11.66□□□□□ -0.54
NCSTN-202ENST00000368063 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
NCSTN-202ENST00000368063 OVCA2Q8WZ82 227 aa11.66□□□□□ -0.54
NCSTN-202ENST00000368063 HLA-CQ95604 372 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms