RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SLC26A1Q9H2B4 701 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 LRP5LA4QPB2 252 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 WISP3O95389 354 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-204ENST00000367248 TNFRSF1AP19438 455 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ECI1P42126 302 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF546Q86UE3 836 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 CMTM4Q8IZR5 234 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 GPANK1O95872 356 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 OPRM1P35372 400 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 CST9LP1Q5W188 147 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 OR10K2Q6IF99 312 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 SLC38A9Q8NBW4 561 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 PP6455Q8WZ26 134 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ASF1BQ9NVP2 202 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 XIRP1Q702N8 1843 aaKnown RBP10.36□□□□□ -0.75
SYNE1-204ENST00000367248 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 K7EPK0 472 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 GPR12P47775 334 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 PRSS45Q7RTY3 260 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 FAM71E2Q8N5Q1 922 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ORAI1Q96D31 301 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 RAB1BQ9H0U4 201 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 MSTNO14793 375 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 CA6P23280 308 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 HTR2BP41595 481 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 TSPAN32Q96QS1 320 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 OR5B12Q96R08 314 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 PLK3Q9H4B4 646 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 LNP1A1A4G5 178 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 CELA2AP08217 269 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 CCR6P51684 374 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 BAXQ07812 192 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 OR51S1Q8NGJ8 323 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 OR52I2Q8NH67 350 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ADAT1Q9BUB4 502 aaKnown RBP10.36□□□□□ -0.75
SYNE1-204ENST00000367248 ISG20L2Q9H9L3 353 aaKnown RBP10.36□□□□□ -0.75
SYNE1-204ENST00000367248 FN3KRPQ9HA64 309 aa10.36□□□□□ -0.75
SYNE1-204ENST00000367248 RAC3P60763 192 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 CD300LDQ6UXZ3 194 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF486Q96H40 463 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-204ENST00000367248 LRP12Q9Y561 859 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PMS2P2O95744 297 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 SLC25A45Q8N413 288 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PCP4L1A6NKN8 68 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 SMAD7O15105 426 aaKnown RBP10.35□□□□□ -0.75
SYNE1-204ENST00000367248 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-204ENST00000367248 CSF3P09919 207 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 CCL3P10147 92 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 GABRA1P14867 456 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 MC2RQ01718 297 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 DEGS2Q6QHC5 323 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 TMEM52Q8NDY8 209 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 FCRL1Q96LA6 429 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PRR19A6NJB7 356 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 HRKO00198 91 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 ALOX5APP20292 161 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 THBS4P35443 961 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 CASP3P42574 277 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 TNFAIP6P98066 277 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-204ENST00000367248 TUSC5Q8IXB3 177 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNE1-204ENST00000367248 FBXO8Q9NRD0 319 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 PILRBQ9UKJ0 227 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 F2RP25116 425 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 ARL16Q0P5N6 197 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 MOGAT1Q96PD6 335 aa10.35□□□□□ -0.75
SYNE1-204ENST00000367248 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 RER1O15258 196 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 SEMG1P04279 462 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 DGCR2P98153 550 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FCN2Q15485 313 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 C2orf76Q3KRA6 126 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-204ENST00000367248 DNASE2BQ8WZ79 361 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FLRT3Q9NZU0 649 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF638Q14966 1978 aaKnown RBP10.34□□□□□ -0.75
SYNE1-204ENST00000367248 MGMTP16455 207 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FUT6P51993 359 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 MICBQ29980 383 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 OR8G2PQ6IF36 304 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 SAP25Q8TEE9 199 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 DEFB108AA8MXU0 73 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF32P17041 273 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 TMEM171Q8WVE6 324 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 DAZAP1Q96EP5 407 aaKnown RBP10.34□□□□□ -0.75
SYNE1-204ENST00000367248 RP1P56715 2156 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FER1L6Q2WGJ9 1857 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ANGPTL7O43827 346 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FAM87AP0C7U9 286 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms