RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SHHQ15465 462 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 OR4D6Q8NGJ1 314 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-201ENST00000361716 SLC22A18Q96BI1 424 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-201ENST00000361716 TMEM68Q96MH6 324 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 GPER1Q99527 375 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 SERTAD3Q9UJW9 196 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 CYP8B1Q9UNU6 501 aa11.35□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF106Q9H2Y7 1883 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 P2RY10O00398 339 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 SCDO00767 359 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 HEXBP07686 556 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 PET100P0DJ07 73 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 RPS23P62266 143 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 TLE1Q04724 770 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 MFGE8Q08431 387 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 RAB7BQ96AH8 199 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 TCTN2Q96GX1 697 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 LPAR4Q99677 370 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 RAB22AQ9UL26 194 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 HEATR5AQ86XA9 2040 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 LILRB3O75022 631 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 LYPD3O95274 346 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 DHPSP49366 369 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 NAAAQ02083 359 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 LINC01590Q5TEZ4 76 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 PEG10Q86TG7 708 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 PMM1Q92871 262 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 SOX7Q9BT81 388 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 MPZL1O95297 269 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 CSTBP04080 98 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 SLC2A1P11166 492 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 PPP1CCP36873 323 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 CX3CR1P49238 355 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 HMGN3Q15651 99 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF239Q16600 458 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 TCEAL6Q6IPX3 200 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 OR5D18Q8NGL1 313 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 FGGYQ96C11 551 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 KTI12Q96EK9 354 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 PRTFDC1Q9NRG1 225 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 DUSP22Q9NRW4 184 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
VAMP1-201ENST00000361716 LUZP4Q9P127 313 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 HSF4Q9ULV5 492 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 MEMO1Q9Y316 297 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 RFNGQ9Y644 331 aa11.34□□□□□ -0.59
VAMP1-201ENST00000361716 TRBV5-5A0A0J9YX44 114 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 OR5H15A6NDH6 313 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 OR5H1A6NKK0 313 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 CDRT15L2A8MXV6 281 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 H0YL77 283 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 HOXB2P14652 356 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 CRABP1P29762 137 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 EMP2P54851 167 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 HLA-DQA1Q5Y7H0 255 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 OR2A5Q96R48 311 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
VAMP1-201ENST00000361716 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 TEX101Q9BY14 249 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 FLVCR1Q9Y5Y0 555 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 FREM3P0C091 2139 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 CLDN4O14493 209 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 SULT1A2P50226 295 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 FOXL2P58012 376 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 PSG6Q00889 435 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 ZNF776Q68DI1 518 aaPredicted RBP11.33□□□□□ -0.6
VAMP1-201ENST00000361716 BTNL8Q6UX41 500 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 MED25Q71SY5 747 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 OR5H2Q8NGV7 314 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 RSC1A1Q92681 617 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 CDC6Q99741 560 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 SLC5A7Q9GZV3 580 aa11.33□□□□□ -0.6
VAMP1-201ENST00000361716 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 CXCL1P09341 107 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 PAX6P26367 422 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 CSNK2A1P68400 391 aaPredicted RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 RPL18Q07020 188 aaKnown RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 SP6Q3SY56 376 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 TMEM128Q5BJH2 165 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 SLC35D3Q5M8T2 416 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 CSNK2A3Q8NEV1 391 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 GPR119Q8TDV5 335 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 NUDT22Q9BRQ3 303 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms