RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 C5AR1P21730 350 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 DDTP30046 118 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 SLC35D2Q76EJ3 337 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 PPP1R3BQ86XI6 285 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 FAM71E2Q8N5Q1 922 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 TSTD1Q8NFU3 115 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 OR4N2Q8NGD1 307 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 OR4D6Q8NGJ1 314 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 CMBLQ96DG6 245 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 LPAR4Q99677 370 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 PIGQQ9BRB3 760 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 DOK5Q9P104 306 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 FPR2P25090 351 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 CHATP28329 748 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 NTSR1P30989 418 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 IGFALSP35858 605 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 RPS23P62266 143 aaKnown RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 MRPS21P82921 87 aaKnown RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 IL15RAQ13261 267 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 VAX1Q5SQQ9 334 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 WBP2NLQ6ICG8 309 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 CSNK1A1LQ8N752 337 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 LCN9Q8WX39 176 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 PPP1R14AQ96A00 147 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 SCRT1Q9BWW7 348 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 CNTNAP3Q9BZ76 1288 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 UBQLN4Q9NRR5 601 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 PHPT1Q9NRX4 125 aaPredicted RBP13.28□□□□□ -0.28
UBAP1-202ENST00000359544 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 AMDHD2Q9Y303 409 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 DMXL1Q9Y485 3027 aa13.27□□□□□ -0.28
UBAP1-202ENST00000359544 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF264O43296 627 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 OR6A2O95222 327 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 BPNT1O95861 308 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 SLC26A5P58743 744 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 CLINT1Q14677 625 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ANKRD55Q3KP44 614 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF574Q6ZN55 896 aaPredicted RBP13.27□□□□□ -0.29
UBAP1-202ENST00000359544 DEFB119Q8N690 84 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF610Q8N9Z0 462 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 UBAC2Q8NBM4 344 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 OR10D4PQ8NGN7 298 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 GALNT14Q96FL9 552 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 LURAP1Q96LR2 239 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 OR2A5Q96R48 311 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 GSKIPQ9P0R6 139 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 THAP10Q9P2Z0 257 aaPredicted RBP13.27□□□□□ -0.29
UBAP1-202ENST00000359544 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.29
UBAP1-202ENST00000359544 XKRYO14609 159 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 SPARCP09486 303 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 FCGR2CP31995 323 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF616Q08AN1 781 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 RSU1Q15404 277 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 C14orf28Q4W4Y0 310 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF529Q6P280 563 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 LYPD6Q86Y78 171 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 RHBDD3Q9Y3P4 386 aa13.27□□□□□ -0.29
UBAP1-202ENST00000359544 H7C1Q1 480 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 CYR61O00622 381 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF354AO60765 605 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 CTSVO60911 334 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 GNB3P16520 340 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 NDUFB7P17568 137 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 THBS4P35443 961 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 NPY4RP50391 375 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 ATG4DQ86TL0 474 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 DMRTC2Q8IXT2 367 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 C19orf47Q8N9M1 422 aaKnown RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 SLC22A18Q96BI1 424 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 A0A087X0M5 115 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 A0A1B0GX30 115 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF587BE7ETH6 402 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 NME2P1O60361 137 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 SEC11BP0C7V7 166 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 DANCRP0C864 163 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 SLC35E2P0CK97 266 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 GABRG2P18507 467 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 CAMLGP49069 296 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 BTG2P78543 158 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 BIKQ13323 160 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 OR2A2Q6IF42 318 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 RBM14Q96PK6 669 aaKnown RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 CNTD2Q9H8S5 307 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 Q9N2J8 555 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
UBAP1-202ENST00000359544 B9D1Q9UPM9 204 aa13.26□□□□□ -0.29
UBAP1-202ENST00000359544 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
UBAP1-202ENST00000359544 LOC107986453A0A1B0GWG9 222 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 BTBD17A6NE02 478 aa13.25□□□□□ -0.29
UBAP1-202ENST00000359544 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms