RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 REEP6Q96HR9 211 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 UBL7Q96S82 380 aaPredicted RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 HDGFL3Q9Y3E1 203 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 ZNF732B4DXR9 585 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 RAB27BO00194 218 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 CTLA4P16410 223 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 CD96P40200 585 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 MYBPHQ13203 477 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 C16orf47Q6ZP98 133 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 RAB39BQ96DA2 213 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 C5orf49A4QMS7 147 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 HOXA1P49639 335 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 FZD2Q14332 565 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 SP6Q3SY56 376 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 AKR7LQ8NHP1 331 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 GPX8Q8TED1 209 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 GNPNAT1Q96EK6 184 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 ZNF764Q96H86 408 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 FER1L6-AS2Q96M78 137 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 UFSP2Q9NUQ7 469 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 METTL12A8MUP2 240 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 BHLHE40O14503 412 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 HLA-HP01893 362 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 RFC3P40938 356 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 PPP1R1AQ13522 171 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 ELFN2Q5R3F8 820 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 ZFP62Q8NB50 900 aaPredicted RBP12.32□□□□□ -0.44
VCP-201ENST00000358901 ANGPTL6Q8NI99 470 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 TSPAN32Q96QS1 320 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 FLRT3Q9NZU0 649 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 GHRLQ9UBU3 117 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 MDFIC2A0A1B0GVS7 189 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 SRFP11831 508 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 AKR1C3P42330 323 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 PCDHB10Q9UN67 800 aa12.32□□□□□ -0.44
VCP-201ENST00000358901 TMEM272A0A1B0GTI8 110 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 RER1O15258 196 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 SPINT2O43291 252 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 IGHA1P01876 353 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 ACKR3P25106 362 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.44
VCP-201ENST00000358901 HIST2H3AQ71DI3 136 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 ZAR1Q86SH2 424 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 HIPK2Q9H2X6 1198 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 B3GAT1Q9P2W7 334 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 H3BP45 60 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 SPRY1O43609 319 aaPredicted RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 SUMO3P55854 103 aaPredicted RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 OR5AP2Q8NGF4 316 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 BORCS7Q96B45 105 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 TRMT61AQ96FX7 289 aaKnown RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 ANKUB1A6NFN9 424 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 H7BYZ3 331 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 HPXP02790 462 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 PSG6Q00889 435 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 FBXL14Q8N1E6 418 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 ZNF808Q8N4W9 903 aaPredicted RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 IFI44Q8TCB0 444 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 PP6455Q8WZ26 134 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 RHOFQ9HBH0 211 aa12.31□□□□□ -0.44
VCP-201ENST00000358901 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
VCP-201ENST00000358901 YKT6O15498 198 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 MPZL1O95297 269 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 EPPINO95925 133 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 INHBBP09529 407 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 COL9A1P20849 921 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 HAAOP46952 286 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 SELENOPP49908 381 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 LHX4Q969G2 390 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
VCP-201ENST00000358901 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 SLC17A5Q9NRA2 495 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 GPR160Q9UJ42 338 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 HSBP1L1C9JCN9 74 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ZNF141Q15928 474 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 ETFDHQ16134 617 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 TMEM91Q6ZNR0 172 aa12.3□□□□□ -0.44
VCP-201ENST00000358901 KMT5CQ86Y97 462 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms