RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MTCP1P56278 107 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 PLP2Q04941 152 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 KHDC3LQ587J8 217 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 FCRL6Q6DN72 434 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 PRR27Q6MZM9 219 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 DPPA3Q6W0C5 159 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
VPS13B-203ENST00000358544 TBX15Q96SF7 602 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 HRASLS2Q9NWW9 162 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 PIGLQ9Y2B2 252 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 CENPEQ02224 2701 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 HLA-DQB1P01920 261 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 PNRC1Q12796 327 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-203ENST00000358544 OR4D9Q8NGE8 314 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 WNT6Q9Y6F9 365 aa5.51□□□□□ -1.53
VPS13B-203ENST00000358544 FGF18O76093 207 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 MLC1Q15049 377 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR11H4Q8NGC9 324 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NMES1Q9C002 83 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 MBD1Q9UIS9 605 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 PLSCR5A0PG75 271 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 A8MVM7 634 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM189-UBE2V1I3L0A0 370 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SMAD6O43541 496 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 RECKO95980 971 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR5H8P0DN80 308 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR3A1P47881 315 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 GNG10P50151 68 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 BLKP51451 505 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 DNAJC5Q9H3Z4 198 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 HSPB2A8KAH6 182 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF207O43670 478 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 PFN3P60673 137 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF92Q03936 586 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 IL10RAQ13651 578 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 HSPB2Q16082 182 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NHLRC3Q5JS37 347 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 PLPP4Q5VZY2 271 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM184AQ6ZMB5 413 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 MAML2Q8IZL2 1156 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SDHCQ99643 169 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NUDT22Q9BRQ3 303 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TNRC6AQ8NDV7 1962 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF729A6NN14 1252 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 DHODHQ02127 395 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR8G2PQ6IF36 304 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ATRAIDQ6UW56 229 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 PPP1R3EQ9H7J1 279 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 HAO2Q9NYQ3 351 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR10J4P0C629 311 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SLC6A12P48065 614 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SGCBQ16585 318 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR4A47Q6IF82 309 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF100Q8IYN0 542 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 FAM181AQ8N9Y4 354 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 STACQ99469 402 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SLCO1C1Q9NYB5 712 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF107Q9UII5 783 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TIMP2P16035 220 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 HIST1H1CP16403 213 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 COX5AP20674 150 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR10J1P30954 320 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NAAAQ02083 359 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 H3BML4 177 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 CCNOP22674 350 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR1D4P47884 311 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 Q5PR19 223 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 LINC00346Q8IVM7 164 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 GPR32P1Q8NGA4 272 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 PSMF1Q92530 271 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 FAM122AQ96E09 287 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TOGARAM1Q9Y4F4 1720 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 TRAPPC2LH3BP13 241 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 FCMRO60667 390 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 IAPPP10997 89 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 CATR1Q13166 79 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 RAET1LQ5VY80 246 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 CATSPERDQ86XM0 798 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 OR5K2Q8NHB8 316 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 RAB7BQ96AH8 199 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ADGRL4Q9HBW9 690 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 COA4Q9NYJ1 87 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 MED19A0JLT2 244 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF749O43361 778 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 DUS4LO95620 317 aaKnown RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 GABREP78334 506 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 CLEC18BQ6UXF7 455 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 NPSR1Q6W5P4 371 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 RTN4IP1Q8WWV3 396 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 IL1F10Q8WWZ1 152 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 MR1Q95460 341 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZFYVE21Q9BQ24 234 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 KIAA1324LA8MWY0 1029 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF737O75373 536 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 HMGA2P52926 109 aa5.5□□□□□ -1.53
VPS13B-203ENST00000358544 SLC48A1Q6P1K1 146 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms