RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 Q6ZS52 159 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 SLC22A18ASQ8N1D0 253 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF524Q96C55 264 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 DDIT4LQ96D03 193 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 UQCC2Q9BRT2 126 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 NXT1Q9UKK6 140 aaKnown RBP5.86□□□□□ -1.47
CSDE1-203ENST00000358528 SLC5A6Q9Y289 635 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 AMDHD2Q9Y303 409 aa5.86□□□□□ -1.47
CSDE1-203ENST00000358528 BORCS7-ASMTA0A0B4J1R7 106 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 NPIPB9F8W1W9 429 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 RAB27BO00194 218 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PLPP3O14495 311 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 EFSO43281 561 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 WISP1O95388 367 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 LINC00271P0C7V0 271 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 GABRG2P18507 467 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 RPL12P30050 165 aaKnown RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 MNX1P50219 401 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF121P58317 390 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SSBP1Q04837 148 aaKnown RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 HNF4GQ14541 408 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 EIF2S3LQ2VIR3 472 aaKnown RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 C14orf28Q4W4Y0 310 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 IGSF11Q5DX21 431 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 C9orf50Q5SZB4 431 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF684Q5T5D7 378 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 OGFOD3Q6PK18 319 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 C20orf196Q8IYI0 205 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZSCAN4Q8NAM6 433 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 OR56B1Q8NGI3 324 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SFT2D1Q8WV19 159 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 EDAQ92838 391 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 GPX7Q96SL4 187 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF2Q9BSG1 426 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SOX7Q9BT81 388 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 LRRC61Q9BV99 259 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ALX4Q9H161 411 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SLC2A4RGQ9NR83 387 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 WIF1Q9Y5W5 379 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 RAB19A4D1S5 217 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 FAM221BA6H8Z2 402 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 MBTPS2O43462 519 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 FZD2Q14332 565 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SHEQ5VZ18 495 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 OR5L1Q8NGL2 311 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 C8orf44Q96CB5 159 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 WWTR1Q9GZV5 400 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 OBP2AQ9NY56 170 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PLEK2Q9NYT0 353 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 CTSFQ9UBX1 484 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PCOLCE2Q9UKZ9 415 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 IGKV1D-43A0A0B4J1Z2 117 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 TRBV11-1A0A0K0K1C0 115 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SPTY2D1-AS1A0A0U1RR47 76 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 hCG_1809904A0A1W2PP81 198 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PR64 198 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PRV1 198 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ANGPTL7O43827 346 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 RFC3P40938 356 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PTGFRP43088 359 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 CAPZBP47756 277 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 CX3CR1P49238 355 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SCAND1P57086 179 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 GABREP78334 506 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 FOXF1Q12946 379 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 RSU1Q15404 277 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF260Q3ZCT1 412 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PABPC1L2AQ5JQF8 200 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 UQCC3Q6UW78 93 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 FAM24BQ8N5W8 94 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 ZDHHC22Q8N966 263 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 GPBAR1Q8TDU6 330 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 S100PBPQ96BU1 408 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 PHYHIPLQ96FC7 376 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 CLCC1Q96S66 551 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 MMP26Q9NRE1 261 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 B3GALT5Q9Y2C3 310 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 SLCO1B1Q9Y6L6 691 aa5.85□□□□□ -1.47
CSDE1-203ENST00000358528 FRG2CA6NGY1 282 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 A6NLC8 198 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 EIF4E2O60573 245 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM127O75204 238 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FAHP16930 419 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 EN2P19622 333 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CSNK1EP49674 416 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 F2RL1P55085 397 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CLDN17P56750 224 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 HERV-K104P61576 105 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 VAMP2P63027 116 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FABP9Q0Z7S8 132 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TAF9Q16594 264 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TSPO2Q5TGU0 170 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 OR2A2Q6IF42 318 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 DRAM2Q6UX65 266 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 RNF144BQ7Z419 303 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 LRRC75AQ8NAA5 344 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 RRNAD1Q96FB5 475 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 REEP6Q96HR9 211 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms