RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 LOXL2Q9Y4K0 774 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 ATP6V1G2-DDX39BF2Z307 99 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 BCL2L11O43521 198 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 IGHA2P01877 340 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 HRH1P35367 487 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 DRAM2Q6UX65 266 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 ABI3BPQ7Z7G0 1075 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 SLC38A6Q8IZM9 456 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 LRRC61Q9BV99 259 aa10.59□□□□□ -0.71
COL9A1-202ENST00000357250 GNB3P16520 340 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 GABRG2P18507 467 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 GPR12P47775 334 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 PPIAP62937 165 aaKnown RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 UQCC3Q6UW78 93 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 GLDNQ6ZMI3 551 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 MOB1BQ7L9L4 216 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 OR4Q3Q8NH05 313 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 TAAR6Q96RI8 345 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 PLA2G12AQ9BZM1 189 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ANKRD10Q9NXR5 420 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 NEU3Q9UQ49 428 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ARID1AO14497 2285 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 RAB13P51153 203 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 HTRA4P83105 476 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 IL11RAQ14626 422 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 OR2A2Q6IF42 318 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ADGRG3Q86Y34 549 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 TMED6Q8WW62 240 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 OR2W5A6NFC9 320 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 BHLHE40O14503 412 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 HS3ST1O14792 307 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 CD37P11049 281 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 COX5AP20674 150 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF121P58317 390 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 MESP2Q0VG99 397 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 BHLHE23Q8NDY6 225 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 CCDC74BQ96LY2 380 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 CHRDL1Q9BU40 450 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 MED9Q9NWA0 146 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 AQP8O94778 261 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 NDUFB6O95139 128 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 RAB35Q15286 201 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 MPPED2Q15777 294 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF141Q15928 474 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 BATFQ16520 125 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF439Q8NDP4 499 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 OR5M1Q8NGP8 315 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF707Q96C28 371 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 AUNIPQ9H7T9 357 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 CRLF2Q9HC73 371 aa10.58□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
COL9A1-202ENST00000357250 C5orf49A4QMS7 147 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 RFPL4AA6NLU0 287 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 RFPL4AL1F8VTS6 287 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 LIMS3P0CW19 117 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 LIMS4P0CW20 117 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 SPTBP11277 2137 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 GLRA1P23415 457 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 ABCD3P28288 659 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 EXOSC2Q13868 293 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF793Q6ZN11 406 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 TEX19Q8NA77 164 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 MARCH1Q8TCQ1 289 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 GPBAR1Q8TDU6 330 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 PCNPQ8WW12 178 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 COX14Q96I36 57 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 ST3GAL6Q9Y274 331 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 LRP3O75074 770 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 PIAS2O75928 621 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 FPR2P25090 351 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 DCTDP32321 178 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 NPBWR1P48145 328 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 PINX1Q96BK5 328 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 OR2A5Q96R48 311 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 SLC6A13Q9NSD5 602 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 MEIKINA0A087WXM9 373 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 EFSO43281 561 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 S100A8P05109 93 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 MYF5P13349 255 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 FUT3P21217 361 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 NOVA1P51513 510 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 SNRPNP63162 240 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 SMIM21Q3B7S5 101 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 GPR32P1Q8NGA4 272 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 C4orf45Q96LM5 186 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms