RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SLC25A4P12235 298 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 C17orf78Q8N4C9 275 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 PSENENQ9NZ42 101 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 UBE2L5PA0A1B0GUS4 154 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 FITM1A5D6W6 292 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 PNLIPRP3Q17RR3 467 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 DHRS11Q6UWP2 260 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 A0A0B4J203 849 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF320A2RRD8 509 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 NRASP01111 189 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 OR51E1Q8TCB6 317 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 WDR89Q96FK6 387 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 DOT1LQ8TEK3 1739 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 PPP2CAP67775 309 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF787Q6DD87 383 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 B3GNT9Q6UX72 402 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 DOK3Q7L591 496 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 EXD3Q8N9H8 876 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 SEC11CQ9BY50 192 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 LHX3Q9UBR4 397 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 CCL26Q9Y258 94 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 MYO5AQ9Y4I1 1855 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 SARGQ9BW04 601 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 LAIR1Q6GTX8 287 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 RDH5Q92781 318 aa10.44□□□□□ -0.74
SPTBN1-202ENST00000356805 CDK2AP1O14519 115 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 PLRG1O43660 514 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 NDUFB6O95139 128 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 FABP4P15090 132 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 SRP14P37108 136 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 DHODHQ02127 395 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 SLCO4C1Q6ZQN7 724 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 VRK3Q8IV63 474 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 BLNKQ8WV28 456 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 PTDSS2Q9BVG9 487 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF154Q13106 437 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 DGAT2L6Q6ZPD8 337 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF573Q86YE8 665 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 TMEM229BQ8NBD8 167 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 OPRM1P35372 400 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 RFC3P40938 356 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 HES4Q9HCC6 221 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF17P17021 662 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 PSMB2P49721 201 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 CSF3RQ99062 836 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 SDCBPO00560 298 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 LIMS3P0CW19 117 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 LIMS4P0CW20 117 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 XAF1Q6GPH4 301 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 CXorf36Q9H7Y0 433 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 USP3Q9Y6I4 520 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 EPXP11678 715 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 APOBEC1P41238 236 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 RELL2Q8NC24 303 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 TAAR6Q96RI8 345 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 AP5S1Q9NUS5 200 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 PIKFYVEQ9Y2I7 2098 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 DNAJC13O75165 2243 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 A0A1B0GTW7 788 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 A0A1W2PPQ1 181 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 AKR1C3P42330 323 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 GPM6AP51674 278 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 FABP5Q01469 135 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 HLXQ14774 488 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 OLIG3Q7RTU3 272 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 TM4SF18Q96CE8 201 aa10.43□□□□□ -0.74
SPTBN1-202ENST00000356805 RPL27P61353 136 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 RHOBP62745 196 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF528Q3MIS6 628 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 SOWAHCQ53LP3 525 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 SPATA46Q5T0L3 261 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 ZNF740Q8NDX6 193 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 NOL4LQ96MY1 436 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 HCFC2Q9Y5Z7 792 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 SCN11AQ9UI33 1791 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 LEUTXA8MZ59 168 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 HSBP1O75506 76 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 B3GALT4O96024 378 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 RNF224P0DH78 156 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 HTN1P15515 57 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 PMCHP20382 165 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 BCL6P41182 706 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 VWA2Q5GFL6 755 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 TRNP1Q6NT89 227 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 RTL10Q7L3V2 364 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 OR2A1Q8NGT9 310 aa10.42□□□□□ -0.74
SPTBN1-202ENST00000356805 ZPBPQ9BS86 351 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms