RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TNK1Q13470 666 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 RFPL4BQ6ZWI9 263 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 LRRC28Q86X40 367 aaPredicted RBP15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 FAM169BQ8N8A8 192 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 OR51A2Q8NGJ7 313 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 APOBEC3DQ96AK3 386 aaPredicted RBP15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 C10orf35Q96D05 121 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 POFUT1Q9H488 388 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 RGCCQ9H4X1 137 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 SPATA2Q9UM82 520 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 HIVEP3Q5T1R4 2406 aa15.68■□□□□ 0.1
SMARCD3-202ENST00000356800 HEATR1Q9H583 2144 aaKnown RBP15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 IGHV1-18A0A0C4DH31 117 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 PAHP00439 452 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CECR9P0C854 216 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 ACKR3P25106 362 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 UQCRFS1P47985 274 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 EVX1P49640 407 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 TLE1Q04724 770 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 TAB1Q15750 504 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 IGFBP7Q16270 282 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 METAP1DQ6UB28 335 aaPredicted RBP15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 SEZ6L2Q6UXD5 910 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 DNAAF1Q8NEP3 725 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CCDC120Q96HB5 630 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CMTM3Q96MX0 182 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 SOSTQ9BQB4 213 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 NPAP1Q9NZP6 1156 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 DIDO1Q9BTC0 2240 aaKnown RBP15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 ZFYVE26Q68DK2 2539 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 hCG_38984A0A1B0GV85 526 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 DHRS7CA6NNS2 312 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 C16orf97H3BN30 126 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 XRCC2O43543 280 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 ICMTO60725 284 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 MTRF1O75570 445 aaKnown RBP15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CALCBP10092 127 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 ZNF20P17024 532 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 PTBP1P26599 531 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CHRNB4P30926 498 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 SCAND1P57086 179 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 FAM3AP98173 230 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 HES5Q5TA89 166 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 GLT8D1Q68CQ7 371 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 NKAIN3Q8N8D7 197 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 SAMD12Q8N8I0 201 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 GALNT11Q8NCW6 608 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 OR51B6Q9H340 312 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 LIN7BQ9HAP6 207 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CDH20Q9HBT6 801 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 CYSLTR2Q9NS75 346 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 TBCCD1Q9NVR7 557 aa15.67■□□□□ 0.1
SMARCD3-202ENST00000356800 FABP12A6NFH5 140 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 ZNF35P13682 527 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 SNRPBP14678 240 aaKnown RBP15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 FAHP16930 419 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 GNLYP22749 145 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 GNALP38405 381 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 GSK3AP49840 483 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 PPA1Q15181 289 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 CDSNQ15517 529 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 FAM166AQ6J272 317 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 CNIH2Q6PI25 160 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 PGAP1Q75T13 922 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 ZNF671Q8TAW3 534 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 AKAP1Q92667 903 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 REPIN1Q9BWE0 567 aaKnown RBP15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 TMEM138Q9NPI0 162 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 STEAP1Q9UHE8 339 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 PIGLQ9Y2B2 252 aa15.66■□□□□ 0.1
SMARCD3-202ENST00000356800 A0A0B4J203 849 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 SLC17A2O00624 439 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 APOA1P02647 267 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 ELK1P19419 428 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 ASCL1P50553 236 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 ZNF83P51522 516 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 GK2Q14410 553 aaPredicted RBP15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 OR8B8Q15620 311 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 ZNF79Q15937 498 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 LYPD6Q86Y78 171 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 OR1M1Q8NGA1 313 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 OR5H6Q8NGV6 325 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 PRR7Q8TB68 274 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 FOXRED1Q96CU9 486 aaPredicted RBP15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 MUCL1Q96DR8 90 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 CCDC32Q9BV29 185 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 PLEKHA1Q9HB21 404 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 PTTG3PQ9NZH4 202 aa15.65■□□□□ 0.1
SMARCD3-202ENST00000356800 SMPD2O60906 423 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 UPK1BO75841 260 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 EIF4EP06730 217 aaKnown RBP15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 ERCC1P07992 297 aaPredicted RBP15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 RAB3AP20336 220 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 BDKRB2P30411 391 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 SPOCK1Q08629 439 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 ALKBH2Q6NS38 261 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 XKRXQ6PP77 449 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 FAM131AQ6UXB0 335 aa15.64■□□□□ 0.09
SMARCD3-202ENST00000356800 OR5AS1Q8N127 324 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms