RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 CLN6Q9NWW5 311 aa17.17■□□□□ 0.34
CHRD-203ENST00000356534 IKZF2Q9UKS7 526 aa17.17■□□□□ 0.34
CHRD-203ENST00000356534 KLHDC2Q9Y2U9 406 aa17.17■□□□□ 0.34
CHRD-203ENST00000356534 FOXH1O75593 365 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 PTBP3O95758 552 aaKnown RBP17.16■□□□□ 0.34
CHRD-203ENST00000356534 GATA3P23771 443 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 HTR1FP30939 366 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 SCGB2A2Q13296 93 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 MAB21L1Q13394 359 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 OR8B8Q15620 311 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 PQLC1Q8N2U9 271 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 OR8S1Q8NH09 359 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 ZNF420Q8TAQ5 688 aaPredicted RBP17.16■□□□□ 0.34
CHRD-203ENST00000356534 FAM81AQ8TBF8 368 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 SGK3Q96BR1 496 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 HRASLS5Q96KN8 279 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 PATZ1Q9HBE1 687 aaKnown RBP17.16■□□□□ 0.34
CHRD-203ENST00000356534 LPAR2Q9HBW0 351 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 ADGRL4Q9HBW9 690 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 TRIM36Q9NQ86 728 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 DCAF16Q9NXF7 216 aa17.16■□□□□ 0.34
CHRD-203ENST00000356534 ANK3Q12955 4377 aaKnown RBP17.16■□□□□ 0.34
CHRD-203ENST00000356534 A0A0G2JMP0 313 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 A0A0U1RQV5 110 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 A0A0X1KG70 313 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 C5orf63A6NC05 138 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 ANXA2P2A6NMY6 339 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 ANOS1P23352 680 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 GSK3AP49840 483 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 CXCR4P61073 352 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 EGR3Q06889 387 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 ZMYND11Q15326 602 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 KCNJ8Q15842 424 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 ZNF322Q6U7Q0 402 aaPredicted RBP17.15■□□□□ 0.34
CHRD-203ENST00000356534 OR4M2Q8NGB6 313 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 OR8B12Q8NGG6 310 aa17.15■□□□□ 0.34
CHRD-203ENST00000356534 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHRD-203ENST00000356534 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 TMEM269A0A1B0GVZ9 245 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 SNTNA6NMZ2 147 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 J3QLI3 93 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PNPP00491 289 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 ATP6V1B1P15313 513 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 THBS2P35442 1172 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 POLR2IP36954 125 aaKnown RBP17.14■□□□□ 0.33
CHRD-203ENST00000356534 SRP14P37108 136 aaKnown RBP17.14■□□□□ 0.33
CHRD-203ENST00000356534 IL5RAQ01344 420 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
CHRD-203ENST00000356534 PRIMA1Q86XR5 153 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 CBR4Q8N4T8 237 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 OR51G2Q8NGK0 314 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PAPOLGQ9BWT3 736 aaKnown RBP17.14■□□□□ 0.33
CHRD-203ENST00000356534 RNF7Q9UBF6 113 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 MIOXQ9UGB7 285 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 COPS3Q9UNS2 423 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 LRCH1Q9Y2L9 728 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 MPC1Q9Y5U8 109 aa17.14■□□□□ 0.33
CHRD-203ENST00000356534 PPIAL4CA0A0B4J2A2 164 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 PLPP2O43688 288 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 FAM20BO75063 409 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 CYB5R3P00387 301 aaPredicted RBP17.13■□□□□ 0.33
CHRD-203ENST00000356534 OR2T7P0C7T2 308 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 ATP6V1E1P36543 226 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 HCCSP53701 268 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 ZSCAN26Q16670 478 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 ESCO2Q56NI9 601 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 PRAMEF6Q5VXH4 476 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 MEDAGQ5VYS4 303 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 OR2T27Q8NH04 317 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 EME1Q96AY2 570 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 UFSP2Q9NUQ7 469 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 FAM206AQ9NX38 181 aa17.13■□□□□ 0.33
CHRD-203ENST00000356534 NUFIP1Q9UHK0 495 aaKnown RBP17.13■□□□□ 0.33
CHRD-203ENST00000356534 A6NLC8 198 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 A8MXK9 166 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 F5H0A9 414 aaPredicted RBP17.12■□□□□ 0.33
CHRD-203ENST00000356534 KRT8P05787 483 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 MAP2K3P46734 347 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 DCAF12L2Q5VW00 463 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 NLRC3Q7RTR2 1065 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 COMMD2Q86X83 199 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 MICU1Q9BPX6 476 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 RTL8AQ9BWD3 113 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 G6PC2Q9NQR9 355 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 ZNF319Q9P2F9 582 aa17.12■□□□□ 0.33
CHRD-203ENST00000356534 IGHV3-64DA0A0J9YX35 117 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 CEACAM18A8MTB9 384 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 LOC110117498-PIK3R3F6TDL0 507 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 PSMD9O00233 223 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 MPZL2O60487 215 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 MTRF1O75570 445 aaKnown RBP17.11■□□□□ 0.33
CHRD-203ENST00000356534 RPS2P15880 293 aaKnown RBP17.11■□□□□ 0.33
CHRD-203ENST00000356534 ZNF404Q494X3 552 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 SLC25A30Q5SVS4 291 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 IL17RELQ6ZVW7 336 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 DVL3Q92997 716 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms