RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CDONQ4KMG0 1287 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR2T2Q6IF00 324 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 PLEKHG7Q6ZR37 379 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 USP51Q70EK9 711 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 FAM57BQ71RH2 274 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 PGAP1Q75T13 922 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 KLBQ86Z14 1044 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 EGFL6Q8IUX8 553 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 C8orf59Q8N0T1 100 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 RFLNBQ8N5W9 214 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF525Q8N782 197 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CCDC54Q8NEL0 328 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CSNK2A3Q8NEV1 391 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR13G1Q8NGZ3 307 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 LGALS12Q96DT0 336 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 REEP6Q96HR9 211 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SLC30A2Q9BRI3 323 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 RHNO1Q9BSD3 238 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CHODLQ9H9P2 273 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SAP30LQ9HAJ7 183 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MRPS18AQ9NVS2 196 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MRPL15Q9P015 296 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MRM2Q9UI43 246 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 FLNBO75369 2602 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 PDZD2O15018 2839 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 hCG_2014768A0A024R1R8 64 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 IGHV4-30-2A0A087WSY4 118 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 A0A096LNT2 108 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 A0A1W2PQL4 384 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 LOC110117498-PIK3R3F6TDL0 507 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 H7C1Q1 480 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SPRY3O43610 288 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 WBP4O75554 376 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 RP2O75695 350 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 IGLV3-1P01715 115 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 HPXP02790 462 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 PIPP12273 146 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CD99P14209 185 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 CR1P17927 2039 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TNFRSF1AP19438 455 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ANOS1P23352 680 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MAGEB1P43366 347 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SRP9P49458 86 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 HCCSP53701 268 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TNFAIP6P98066 277 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF85Q03923 595 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SLC3A1Q07837 685 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MFGE8Q08431 387 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 MRPL28Q13084 256 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TNK1Q13470 666 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR8B8Q15620 311 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TSTQ16762 297 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 KLHL22Q53GT1 634 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF684Q5T5D7 378 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 BCL2L15Q5TBC7 163 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 Q6ZR03 302 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SSX6Q7RTT6 188 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 KCTD20Q7Z5Y7 419 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 NAA40Q86UY6 237 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR5AS1Q8N127 324 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 YIPF7Q8N8F6 280 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF540Q8NDQ6 660 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR56B2PQ8NGI1 322 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 OR2AE1Q8NHA4 323 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 HAVCR2Q8TDQ0 301 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SPRYD4Q8WW59 207 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 NRG4Q8WWG1 115 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 YIPF5Q969M3 257 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TBX5Q99593 518 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ADAT1Q9BUB4 502 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 TTTY10Q9BZA0 68 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 PBOV1Q9GZY1 135 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 FGF20Q9NP95 211 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 DECR2Q9NUI1 292 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 IL19Q9UHD0 177 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 RRP15Q9Y3B9 282 aaKnown RBP3.37□□□□□ -1.87
CNOT4-202ENST00000356162 SNX5Q9Y5X3 404 aa3.37□□□□□ -1.87
CNOT4-202ENST00000356162 ABCA12Q86UK0 2595 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 IGHV1-69-2A0A0G2JMI3 117 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM269A0A1B0GVZ9 245 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 DAPL1A0PJW8 107 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 C5orf63A6NC05 138 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 EFCAB10A6NFE3 127 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 TRIM64A6NGJ6 449 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 TRIM64BA6NI03 449 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 DHRS7CA6NNS2 312 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 ANKRD30BLA7E2S9 258 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 CLDN25C9JDP6 229 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 MLNRO43193 412 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 GMDSO60547 372 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 APOL3O95236 402 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 FADS2O95864 444 aaKnown RBP3.36□□□□□ -1.87
CNOT4-202ENST00000356162 CCL1P22362 96 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 NR4A2P43354 598 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 GPR6P46095 362 aaPredicted RBP3.36□□□□□ -1.87
CNOT4-202ENST00000356162 AQP4P55087 323 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 FAM3AP98173 230 aa3.36□□□□□ -1.87
CNOT4-202ENST00000356162 LOXL1Q08397 574 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms