RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 F5H5K5 113 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 GPR3P46089 330 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 RAB2AP61019 212 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 TLE3Q04726 772 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF813Q6ZN06 617 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 FLVCR1-AS1Q8TAF5 88 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 TCTEX1D2Q8WW35 142 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PIGTQ969N2 578 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 SLCO5A1Q9H2Y9 848 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 C14orf166Q9Y224 244 aaKnown RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 R4GMQ9 66 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 TRAV36DV7A0A075B6V5 113 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 COLCA2A8K830 154 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 GPR37O15354 613 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 CAV2P51636 162 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 BIDP55957 195 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 C14orf28Q4W4Y0 310 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM244Q5VVB8 128 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 CATSPERDQ86XM0 798 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 C20orf196Q8IYI0 205 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 C19orf47Q8N9M1 422 aaKnown RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 ASB17Q8WXJ9 295 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 PDE7BQ9NP56 450 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 SFTPDP35247 375 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 SLC22A24Q8N4F4 322 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 LRRC75AQ8NAA5 344 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 MESP1Q9BRJ9 268 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 DOCK8Q8NF50 2099 aa12.11□□□□□ -0.47
TRIM4-203ENST00000355947 CA3P07451 260 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 AKT2P31751 481 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF440Q8IYI8 595 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 OR5D14Q8NGL3 314 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 FNDC9Q8TBE3 224 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 YBX2Q9Y2T7 364 aaKnown RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 CCDC85CA6NKD9 419 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 FOXS1O43638 330 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 TNFP01375 233 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 HNRNPA2B1P22626 353 aaKnown RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM33P57088 247 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 EDAQ92838 391 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 SLAMF6Q96DU3 332 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 PLRG1O43660 514 aaKnown RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 PGCP20142 388 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 S100A2P29034 98 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 HAGHQ16775 308 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
TRIM4-203ENST00000355947 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-203ENST00000355947 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF217O75362 1048 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 CLN5O75503 358 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 IFNA21P01568 189 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 MYF5P13349 255 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 CSRP1P21291 193 aaKnown RBP12.09□□□□□ -0.47
TRIM4-203ENST00000355947 SLC30A7Q8NEW0 376 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 OR9K2Q8NGE7 335 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 GPR84Q9NQS5 396 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 CYP8B1Q9UNU6 501 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 MEMO1Q9Y316 297 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF850A8MQ14 1090 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 GUK1Q16774 197 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 PRSS54Q6PEW0 395 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 SLC43A2Q8N370 569 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 PBOV1Q9GZY1 135 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 NXT1Q9UKK6 140 aaKnown RBP12.09□□□□□ -0.47
TRIM4-203ENST00000355947 RAD51DO75771 328 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 GLP1RP43220 463 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 RRADP55042 308 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 USF2Q15853 346 aaPredicted RBP12.09□□□□□ -0.47
TRIM4-203ENST00000355947 ABCA11PQ4W5N1 156 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 C11orf40Q8WZ69 217 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 DYRK2Q92630 601 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms