RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ALG1L2C9J202 215 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 RPL12P30050 165 aaKnown RBP16.22■□□□□ 0.19
COL18A1-202ENST00000355480 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-202ENST00000355480 A0A1W2PR80 420 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 SLC25A6P12236 298 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 TIGITQ495A1 244 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF705AQ6ZN79 300 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-202ENST00000355480 CA5BP1Q8WTZ4 195 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 OR6C68A6NDL8 312 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 E5RGE8 158 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 RIMKLAQ8IXN7 391 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 LHX4Q969G2 390 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 FBXW5Q969U6 566 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 PELI1Q96FA3 418 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 PIGMQ9H3S5 423 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF835Q9Y2P0 537 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 NSG2Q9Y328 171 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ANGPTL7O43827 346 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 CRYBA1P05813 215 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 BMP5P22003 454 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 RNPS1Q15287 305 aaKnown RBP16.21■□□□□ 0.19
COL18A1-202ENST00000355480 BTNL8Q6UX41 500 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 BTLAQ7Z6A9 289 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 MOB3AQ96BX8 217 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 H7BYZ3 331 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF90Q03938 601 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 PRSS36Q5K4E3 855 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ACOT7LQ6ZUV0 252 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 TMED6Q8WW62 240 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 RTN4IP1Q8WWV3 396 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ERGIC1Q969X5 290 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 IGHV1OR21-1A0A087WYE8 117 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 PPP1R2P9O14990 202 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 CYTIPO60759 359 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF117Q03924 483 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 FAHD1Q6P587 224 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 HIST2H3AQ71DI3 136 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 FLVCR2Q9UPI3 526 aa16.21■□□□□ 0.19
COL18A1-202ENST00000355480 PPP5D1E7EU14 171 aa16.21■□□□□ 0.18
COL18A1-202ENST00000355480 COX7A2P2O60397 106 aa16.21■□□□□ 0.18
COL18A1-202ENST00000355480 RPL7L1Q6DKI1 246 aaKnown RBP16.21■□□□□ 0.18
COL18A1-202ENST00000355480 NRAPQ86VF7 1730 aa16.21■□□□□ 0.18
COL18A1-202ENST00000355480 LRP12Q9Y561 859 aa16.21■□□□□ 0.18
COL18A1-202ENST00000355480 TIMM9Q9Y5J7 89 aa16.21■□□□□ 0.18
COL18A1-202ENST00000355480 SEMG1P04279 462 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 OR4E1P0C645 316 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 SMIM18P0DKX4 95 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 TCTN1Q2MV58 587 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ACER2Q5QJU3 275 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 H3F3CQ6NXT2 135 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 FAM122CQ6P4D5 195 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 SLC36A1Q7Z2H8 476 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ADPRHL1Q8NDY3 354 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 STUMQ69YW2 141 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ANKRD37Q7Z713 158 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 TMEM30CPA0ZSE6 113 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 SBK3P0C264 359 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 COX5AP20674 150 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 TRIP6Q15654 476 aaKnown RBP16.2■□□□□ 0.18
COL18A1-202ENST00000355480 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 TEX51A0A1B0GUA7 166 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 MBTPS2O43462 519 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF354AO60765 605 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-202ENST00000355480 TGFBR1P36897 503 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-202ENST00000355480 CDH26Q8IXH8 852 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 PP6455Q8WZ26 134 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 C14orf79Q96F83 325 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 MBP02144 154 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ZBTB25P24278 435 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 MICBQ29980 383 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 PLPPR2Q96GM1 343 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 ARHGDIGQ99819 225 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 CHST6Q9GZX3 395 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 SMOC1Q9H4F8 434 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 DUSP21Q9H596 190 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 PLEKHA2Q9HB19 425 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 FGF20Q9NP95 211 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-202ENST00000355480 FZR1Q9UM11 496 aa16.2■□□□□ 0.18
COL18A1-202ENST00000355480 A0A0A6YYJ9 748 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 XKRY2A2RUG3 117 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 SSPNQ14714 243 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF239Q16600 458 aaKnown RBP16.19■□□□□ 0.18
COL18A1-202ENST00000355480 TMEM92Q6UXU6 159 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 OR2T6Q8NHC8 308 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 AUNIPQ9H7T9 357 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 DEFA6Q01524 100 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 OR5I1Q13606 314 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 RAB35Q15286 201 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 OR10V1Q8NGI7 309 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 OTOSQ8NHW6 89 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 FAM122AQ96E09 287 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 PDGFBP01127 241 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-202ENST00000355480 LILRA6Q6PI73 481 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 ZNRF4Q8WWF5 429 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 EXTL1Q92935 676 aa16.19■□□□□ 0.18
COL18A1-202ENST00000355480 RPUSD4Q96CM3 377 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms