RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TRAV17A0A0B4J275 112 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 JTBO76095 146 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 METTL15P1P0C7V9 234 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 PRDX4Q13162 271 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 Q6ZNX1 250 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR4Q3Q8NH05 313 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 GALMQ96C23 342 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF391Q9UJN7 358 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 TAAR5O14804 337 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 AQP6Q13520 282 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF793Q6ZN11 406 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 C17orf107Q6ZR85 190 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 CDH26Q8IXH8 852 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-202ENST00000355133 FSCN3Q9NQT6 498 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 TRGV10A0A0A0MS01 117 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 FAM90A27PA6NNH2 459 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ALG1L2C9J202 215 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 H3BMH7 237 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF354AO60765 605 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 OR2F2O95006 317 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 PDGFAP04085 211 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 CTGFP29279 349 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 OR2F1Q13607 317 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 OR2A2Q6IF42 318 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 PRSS41Q7RTY9 318 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 DUSP21Q9H596 190 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF835Q9Y2P0 537 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 CHEK1O14757 476 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 GABRB1P18505 474 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 HIST2H3AQ71DI3 136 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ERGIC1Q969X5 290 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 GNPNAT1Q96EK6 184 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ARHGDIGQ99819 225 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ADAT1Q9BUB4 502 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 OR6C68A6NDL8 312 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 CTSVO60911 334 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 GPANK1O95872 356 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 PEX11BO96011 259 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 COL9A1P20849 921 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 FBXL14Q8N1E6 418 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 AMER3Q8N944 861 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 SLC6A13Q9NSD5 602 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 WNT16Q9UBV4 365 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 MEX3AA1L020 520 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 NDUFB3O43676 98 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 EVX1P49640 407 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF90Q03938 601 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 ANKRD37Q7Z713 158 aa11.88□□□□□ -0.51
SCN8A-202ENST00000355133 FGF20Q9NP95 211 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-202ENST00000355133 DCTN6O00399 190 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 BPIFB3P59826 476 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 FMODQ06828 376 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 RTN4IP1Q8WWV3 396 aaPredicted RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 PIGMQ9H3S5 423 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 CELA2BP08218 269 aaPredicted RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 DEFA6Q01524 100 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF239Q16600 458 aaKnown RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 ADPRHL1Q8NDY3 354 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 LHX4Q969G2 390 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 DUS3LQ96G46 650 aaKnown RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 UMAD1C9J7I0 102 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 E5RGE8 158 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 C1QBP02746 253 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 CD1EP15812 388 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 THBS4P35443 961 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 PMP22Q01453 160 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 PXDC1Q5TGL8 231 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 TMEM215Q68D42 235 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 CISD3P0C7P0 127 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 CD80P33681 288 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 DHODHQ02127 395 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 C17orf78Q8N4C9 275 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 EDARADDQ8WWZ3 215 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms