RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 WBP2NLQ6ICG8 309 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CLEC2AQ6UVW9 174 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SHISA6Q6ZSJ9 500 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 THNSL2Q86YJ6 484 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 GABRG1Q8N1C3 465 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 C17orf78Q8N4C9 275 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SMRP1Q8NCR6 262 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 LMX1AQ8TE12 382 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 RRNAD1Q96FB5 475 aaKnown RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 LRRC61Q9BV99 259 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 ZNF576Q9H609 170 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 PLEKHA1Q9HB21 404 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 MMP25Q9NPA2 562 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SLC22A13Q9Y226 551 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CFAP54Q96N23 3096 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CBY3A6NI87 242 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 H7C417 338 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CYB5BO43169 146 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CRTAPO75718 401 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 GLSO94925 669 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 UTS2O95399 124 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 TACSTD2P09758 323 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 EGR4Q05215 589 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MESTQ5EB52 335 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ATPAF1Q5TC12 328 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 IL34Q6ZMJ4 242 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 SNX22Q96L94 193 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 POTEKPQ9BYX7 375 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 NMNAT2Q9BZQ4 307 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 METTL9Q9H1A3 318 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 KCNJ16Q9NPI9 418 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MTFP1Q9UDX5 166 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 IGHV5-51A0A0C4DH38 117 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 METTL12A8MUP2 240 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 GEMIN2O14893 280 aaKnown RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 UPK3AO75631 287 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 C1QL1O75973 258 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CYB5AP00167 134 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 SFTPBP07988 381 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 NHLH2Q02577 135 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 HGFACQ04756 655 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 GLO1Q04760 184 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ZP2Q05996 745 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MEP1BQ16820 701 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 PRTGQ2VWP7 1150 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 TMEM205Q6UW68 189 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 UNQ9370/PRO34162Q6UXP9 181 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CHRDL2Q6WN34 429 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ZNF595Q8IYB9 648 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ZNF610Q8N9Z0 462 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CHST4Q8NCG5 386 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MR1Q95460 341 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 TAAR8Q969N4 342 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 KLHDC7BQ96G42 594 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 TSPAN32Q96QS1 320 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ZNF587Q96SQ5 575 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 C2orf88Q9BSF0 95 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 DDA1Q9BW61 102 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 CST11Q9H112 138 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 UBQLN4Q9NRR5 601 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 OR14J1Q9UGF5 321 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 KPTNQ9Y664 436 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 ATXN7O15265 892 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 ZNF264O43296 627 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 TRGC2P03986 189 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 RAB4AP20338 218 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 DEFB133Q30KQ1 61 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MIDNQ504T8 468 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 LCN10Q6JVE6 187 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 SLC16A9Q7RTY1 509 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MDGA2Q7Z553 956 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 MARCH3Q86UD3 253 aa8.37□□□□□ -1.07
SMG6-202ENST00000354901 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
SMG6-202ENST00000354901 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 CDC40O60508 579 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMG6-202ENST00000354901 ADAP1O75689 374 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 SLC2A1P11166 492 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 RPL29P47914 159 aaKnown RBP8.36□□□□□ -1.07
SMG6-202ENST00000354901 FHITP49789 147 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 SLC35D3Q5M8T2 416 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 ATG4DQ86TL0 474 aaPredicted RBP8.36□□□□□ -1.07
SMG6-202ENST00000354901 DND1Q8IYX4 353 aaKnown RBP8.36□□□□□ -1.07
SMG6-202ENST00000354901 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
SMG6-202ENST00000354901 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 OR10AD1Q8NGE0 317 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 OR51F2Q8NH61 342 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 COMMD4Q9H0A8 199 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 ELOVL3Q9HB03 270 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 OR5H15A6NDH6 313 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 OR5H1A6NKK0 313 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 OR6A2O95222 327 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 RENP00797 406 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 RAB40ALP0C0E4 278 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 CD79AP11912 226 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 CXCR1P25024 350 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 PSMB6P28072 239 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 RPS4XP62701 263 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms