RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 OR52W1Q6IF63 320 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 ZNF385AQ96PM9 386 aaKnown RBP19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 SPACA5Q96QH8 159 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 SF3B5Q9BWJ5 86 aaKnown RBP19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 B4E171 279 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 I3L521 148 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 SSX5O60225 188 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 CRYZL1O95825 349 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 NAT1P18440 290 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 THBS4P35443 961 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 TSPAN7P41732 249 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 OR3A4PP47883 348 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 ZNF84P51523 738 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 AANATQ16613 207 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 OR6K3Q8NGY3 331 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 C10orf35Q96D05 121 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 MED9Q9NWA0 146 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 ANAPC10Q9UM13 185 aa19.6■□□□□ 0.73
NKX2-1-201ENST00000354822 TEX51A0A1B0GUA7 166 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 HIST1H1DP16402 221 aaKnown RBP19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 ALDH3B1P43353 468 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 GFOD2Q3B7J2 385 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 PHYHD1Q5SRE7 291 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 TMEM104Q8NE00 496 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 OR4K15Q8NH41 348 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 NABP1Q96AH0 204 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 PHB2Q99623 299 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 NICN1Q9BSH3 213 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 RBM24Q9BX46 236 aaKnown RBP19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 CST11Q9H112 138 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 A0A0D9SG52 128 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 OR5H14A6NHG9 310 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 GP1BAP07359 652 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 CBX5P45973 191 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 SFRP5Q5T4F7 317 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 RFPL4BQ6ZWI9 263 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 ZNF546Q86UE3 836 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 TMEM105Q8N8V8 129 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 MITD1Q8WV92 249 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 PCNPQ8WW12 178 aaKnown RBP19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 PP6455Q8WZ26 134 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 COMMD9Q9P000 198 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 FOXD3Q9UJU5 478 aaPredicted RBP19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 V9GYS6 101 aa19.59■□□□□ 0.73
NKX2-1-201ENST00000354822 TECTAO75443 2155 aa19.58■□□□□ 0.73
NKX2-1-201ENST00000354822 A0A0A6YYD4 124 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 IGHV3-15A0A0B4J1V0 119 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 A0A0J9YW62 118 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 C9orf170A2RU37 121 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 F5H5K5 113 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 DHRS3O75911 302 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 IL13RA1P78552 427 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 SLC22A6Q4U2R8 563 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 Q6ZSR3 168 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 SLC51BQ86UW2 128 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 MRGPRFQ96AM1 343 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 UCN2Q96RP3 112 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 RDH8Q9NYR8 311 aa19.58■□□□□ 0.72
NKX2-1-201ENST00000354822 TRAV14DV4A0A0A6YYC5 116 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 IGKV1-9A0A0C4DH69 117 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 MTRF1O75570 445 aaKnown RBP19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 SRD5A2P31213 254 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 OTX1P32242 354 aaPredicted RBP19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 TAS2R31P59538 309 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 RAC3P60763 192 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 C17orf107Q6ZR85 190 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 RNF144BQ7Z419 303 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 C20orf196Q8IYI0 205 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 KCNE4Q8WWG9 221 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 SPTSSAQ969W0 71 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 OCSTAMPQ9BR26 566 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 ULBP2Q9BZM5 246 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 G3V3Y1 287 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 SOCS1O15524 211 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 CRTAPO75718 401 aaPredicted RBP19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 P04436 131 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 SLC25A4P12235 298 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 SLC6A9P48067 706 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 PPP1R1AQ13522 171 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 KISS1Q15726 138 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 PLAC9Q5JTB6 97 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 VAX1Q5SQQ9 334 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 FAM27BQ5VT28 67 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 FAM89BQ8N5H3 189 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 ZIC4Q8N9L1 334 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 PDCD10Q9BUL8 212 aa19.57■□□□□ 0.72
NKX2-1-201ENST00000354822 TNFSF11O14788 317 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 PTGFRP43088 359 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 TMEM50BP56557 158 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 MRPS34P82930 218 aaKnown RBP19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 ARRDC1Q8N5I2 433 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 LYZL4Q96KX0 146 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 OR10A2Q9H208 303 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 BANF2Q9H503 90 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 FLVCR1Q9Y5Y0 555 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 PMP2P02689 132 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 CHAF1BQ13112 559 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 LPAL2Q16609 132 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 DCAF12Q5T6F0 453 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms