RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 COL19A1Q14993 1142 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 ACOT7LQ6ZUV0 252 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 OR2W3Q7Z3T1 314 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 C1QL2Q7Z5L3 287 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 ZC3H10Q96K80 434 aaKnown RBP17.27■□□□□ 0.36
COL13A1-201ENST00000354547 ZNF416Q9BWM5 594 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 MYOZ1Q9NP98 299 aaPredicted RBP17.27■□□□□ 0.36
COL13A1-201ENST00000354547 SLC2A8Q9NY64 477 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 RASL12Q9NYN1 266 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 CSAG2Q9Y5P2 127 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 COL6A3P12111 3177 aa17.27■□□□□ 0.36
COL13A1-201ENST00000354547 IGHV5-10-1A0A0J9YXX1 117 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 CDK2AP1O14519 115 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 PGAM2P15259 253 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 HSD17B13Q7Z5P4 300 aaPredicted RBP17.27■□□□□ 0.35
COL13A1-201ENST00000354547 DNASE2BQ8WZ79 361 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 DCUN1D4Q92564 292 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 CCDC74BQ96LY2 380 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 GNRHR2Q96P88 292 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 SLC25A32Q9H2D1 315 aa17.27■□□□□ 0.35
COL13A1-201ENST00000354547 ARPC4-TTLL3A0A0A6YYG9 625 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 NPIPB13A6NJU9 1138 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 NPIPB4C9JG80 1138 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 OR2F2O95006 317 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 OR2F1Q13607 317 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 GALNTL5Q7Z4T8 443 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 ZDHHC22Q8N966 263 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 PGAM5Q96HS1 289 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 PCED1AQ9H1Q7 454 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 CHMP1AQ9HD42 196 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-201ENST00000354547 ZNF107Q9UII5 783 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-201ENST00000354547 MUC3AQ02505 3323 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 MPTX1A8MV57 137 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 SIGLEC6O43699 453 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 PLATP00750 562 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 LPCAT3Q6P1A2 487 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 BHLHE23Q8NDY6 225 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 OR51T1Q8NGJ9 327 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 SPACA9Q96E40 222 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-201ENST00000354547 IGKV1-9A0A0C4DH69 117 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 SLC25A47Q6Q0C1 308 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 PPP1R3BQ86XI6 285 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 SLC22A8Q8TCC7 542 aa17.26■□□□□ 0.35
COL13A1-201ENST00000354547 OR5H15A6NDH6 313 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 HIST1H1DP16402 221 aaKnown RBP17.25■□□□□ 0.35
COL13A1-201ENST00000354547 SERPINA2P20848 420 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 MSX1P28360 303 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 TERB2Q8NHR7 220 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 KCNG3Q8TAE7 436 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 OXGR1Q96P68 337 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 GAREM1Q9H706 876 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 ASF1BQ9NVP2 202 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 IL2RAP01589 272 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 AMY2BP19961 511 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 GUCA1AP43080 201 aaPredicted RBP17.25■□□□□ 0.35
COL13A1-201ENST00000354547 FOXRED2Q8IWF2 684 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 DTWD2Q8NBA8 298 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 ELP5Q8TE02 316 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 ASB13Q8WXK3 278 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 C1orf147Q96MC9 270 aaPredicted RBP17.25■□□□□ 0.35
COL13A1-201ENST00000354547 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
COL13A1-201ENST00000354547 DUS4LO95620 317 aaKnown RBP17.24■□□□□ 0.35
COL13A1-201ENST00000354547 SLC25A4P12235 298 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 SPEM1Q8N4L4 309 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 NAXEQ8NCW5 288 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 BPIFCQ8NFQ6 507 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 RBM24Q9BX46 236 aaKnown RBP17.24■□□□□ 0.35
COL13A1-201ENST00000354547 ZNF160Q9HCG1 818 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 PNRC2Q9NPJ4 139 aaKnown RBP17.24■□□□□ 0.35
COL13A1-201ENST00000354547 STMND1H3BQB6 276 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 FAHP16930 419 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 OR3A2P47893 321 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 SNTB1Q13884 538 aaKnown RBP17.24■□□□□ 0.35
COL13A1-201ENST00000354547 PHYHD1Q5SRE7 291 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 DTX1Q86Y01 620 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 OR6X1Q8NH79 312 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 PIGTQ969N2 578 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 FBXW5Q969U6 566 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 UCN2Q96RP3 112 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 C5orf66Q9H5L9 145 aa17.24■□□□□ 0.35
COL13A1-201ENST00000354547 DBHP09172 617 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 CNR1P21554 472 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 PSMB6P28072 239 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 CXCL12P48061 93 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 RAET1LQ5VY80 246 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 ZNF529Q6P280 563 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 HOGA1Q86XE5 327 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 ZNF385AQ96PM9 386 aaKnown RBP17.23■□□□□ 0.35
COL13A1-201ENST00000354547 CHRM2P08172 466 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 OR1S2Q8NGQ3 325 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 OR5H2Q8NGV7 314 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 GSKIPQ9P0R6 139 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 CSNK2A1P68400 391 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-201ENST00000354547 CSNK2A3Q8NEV1 391 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 PAQR8Q8TEZ7 354 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 WNT2BQ93097 391 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 PRELID1Q9Y255 219 aa17.23■□□□□ 0.35
COL13A1-201ENST00000354547 KNG1P01042 644 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms