RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CYSLTR2Q9NS75 346 aa18.87■□□□□ 0.61
SHMT1-203ENST00000354098 ZNF391Q9UJN7 358 aa18.87■□□□□ 0.61
SHMT1-203ENST00000354098 FBXO9Q9UK97 447 aaPredicted RBP18.87■□□□□ 0.61
SHMT1-203ENST00000354098 BLOC1S6Q9UL45 172 aa18.87■□□□□ 0.61
SHMT1-203ENST00000354098 ERGIC3Q9Y282 383 aa18.87■□□□□ 0.61
SHMT1-203ENST00000354098 SIRT4Q9Y6E7 314 aaPredicted RBP18.87■□□□□ 0.61
SHMT1-203ENST00000354098 H0YL77 283 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 MYL12BO14950 172 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 IGHV1-46P01743 117 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 IGHV4-39P01824 125 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 LIPAP38571 399 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 ATP5J2P56134 94 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 TRMT61AQ96FX7 289 aaKnown RBP18.86■□□□□ 0.61
SHMT1-203ENST00000354098 PPP1R3EQ9H7J1 279 aa18.86■□□□□ 0.61
SHMT1-203ENST00000354098 CGGBP1Q9UFW8 167 aaPredicted RBP18.86■□□□□ 0.61
SHMT1-203ENST00000354098 OR4C45A6NMZ5 311 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 HLA-DPB1P04440 258 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 CA6P23280 308 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 TGM4P49221 684 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 CCR9P51686 369 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 TSTQ16762 297 aaKnown RBP18.85■□□□□ 0.61
SHMT1-203ENST00000354098 PRSS48Q7RTY5 328 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 OR2Z1Q8NG97 314 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 RAB1BQ9H0U4 201 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 MLNRO43193 412 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 WNT4P56705 351 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 CCL8P80075 99 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 MRPL28Q13084 256 aaKnown RBP18.85■□□□□ 0.61
SHMT1-203ENST00000354098 SPRNQ5BIV9 151 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 PLPP7Q8NBV4 271 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 OR10AD1Q8NGE0 317 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 OR13G1Q8NGZ3 307 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 OR5M11Q96RB7 305 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 TMEM100Q9NV29 134 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 RHBDD3Q9Y3P4 386 aa18.85■□□□□ 0.61
SHMT1-203ENST00000354098 NCR1O76036 304 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 DDOSTP39656 456 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 MAP2K4P45985 399 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 ZFP41Q8N8Y5 198 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 DVL3Q92997 716 aaPredicted RBP18.84■□□□□ 0.61
SHMT1-203ENST00000354098 PDCD1LG2Q9BQ51 273 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 MND1Q9BWT6 205 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 YTHDF1Q9BYJ9 559 aaKnown RBP18.84■□□□□ 0.61
SHMT1-203ENST00000354098 MRPL15Q9P015 296 aaKnown RBP18.84■□□□□ 0.61
SHMT1-203ENST00000354098 ZDHHC8Q9ULC8 765 aa18.84■□□□□ 0.61
SHMT1-203ENST00000354098 LSM2Q9Y333 95 aaKnown RBP18.84■□□□□ 0.61
SHMT1-203ENST00000354098 TRBV2A0A0J9YWF9 115 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 LOC107986453A0A1B0GWG9 222 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 LMX1BO60663 402 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 DHRS3O75911 302 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 ZFPL1O95159 310 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 F12P00748 615 aaPredicted RBP18.83■□□□□ 0.61
SHMT1-203ENST00000354098 HPXP02790 462 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 UBCP0CG48 685 aaKnown RBP18.83■□□□□ 0.61
SHMT1-203ENST00000354098 CCL1P22362 96 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 MAP2K3P46734 347 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 EFNA4P52798 201 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 CDH15P55291 814 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 GABARAPL2P60520 117 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 CDK5R1Q15078 307 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 CCDC58Q4VC31 144 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 ZMAT1Q5H9K5 638 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 RPL22L1Q6P5R6 122 aaKnown RBP18.83■□□□□ 0.61
SHMT1-203ENST00000354098 OR14K1Q8NGZ2 314 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 OR10AC1Q8NH08 325 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 ELMOD3Q96FG2 381 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 TRIM36Q9NQ86 728 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 ITGB1BP2Q9UKP3 347 aa18.83■□□□□ 0.61
SHMT1-203ENST00000354098 A0A1B0GVI7 797 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 A0A1B0GWJ7 208 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 LOC390937A0A1W2PQ73 354 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 A6NIN4 97 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 OGG1O15527 345 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 SYT7O43581 403 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 Q6ZSR3 168 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 DOK3Q7L591 496 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 LRRC75A-AS1Q8N1F1 130 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 ZNF676Q8N7Q3 588 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 SEMA6DQ8NFY4 1073 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 OR51A4Q8NGJ6 313 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 HAVCR2Q8TDQ0 301 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 PIGLQ9Y2B2 252 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 V9GYS6 101 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 ANKRD30BLA7E2S9 258 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 F5H5P2 479 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 SSX4O60224 188 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 MTRF1O75570 445 aaKnown RBP18.82■□□□□ 0.6
SHMT1-203ENST00000354098 ISG15P05161 165 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 ADH4P08319 380 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 FAHP16930 419 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 MED22Q15528 200 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 TMEM244Q5VVB8 128 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 CSNK2A3Q8NEV1 391 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 OR5AK2Q8NH90 309 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 RPS4Y2Q8TD47 263 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 NEU4Q8WWR8 484 aaPredicted RBP18.82■□□□□ 0.6
SHMT1-203ENST00000354098 NKIRAS2Q9NYR9 191 aa18.82■□□□□ 0.6
SHMT1-203ENST00000354098 PNMA8CA0A1B0GUJ8 204 aa18.81■□□□□ 0.6
SHMT1-203ENST00000354098 ERCC1P07992 297 aaPredicted RBP18.81■□□□□ 0.6
SHMT1-203ENST00000354098 ATP6V1B1P15313 513 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms