RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 DEGS2Q6QHC5 323 aa13.89□□□□□ -0.19
PTPRU-201ENST00000345512 BATF2Q8N1L9 274 aa13.89□□□□□ -0.19
PTPRU-201ENST00000345512 ARL5BQ96KC2 179 aa13.89□□□□□ -0.19
PTPRU-201ENST00000345512 UQCC2Q9BRT2 126 aa13.89□□□□□ -0.19
PTPRU-201ENST00000345512 NMNAT2Q9BZQ4 307 aa13.89□□□□□ -0.19
PTPRU-201ENST00000345512 CRHP06850 196 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 CTSBP07858 339 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 ASAH2BP0C7U1 165 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 GLRA1P23415 457 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR2B8PP59922 312 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SRYQ05066 204 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 CATSPERDQ86XM0 798 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR52H1Q8NGJ2 320 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR14K1Q8NGZ2 314 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 AKR1E2Q96JD6 320 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SGCZQ96LD1 299 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SLC25A31Q9H0C2 315 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 A0A1W2PQF6 199 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
PTPRU-201ENST00000345512 NKX6-1P78426 367 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-201ENST00000345512 PLGLB1Q02325 96 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 MGAT2Q10469 447 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 LGI3Q8N145 548 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 TMEM217Q8N7C4 229 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SLC38A9Q8NBW4 561 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 RGP1Q92546 391 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-201ENST00000345512 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 NECAP2Q9NVZ3 263 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 XRCC2O43543 280 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 GUSBP08236 651 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR5H8P0DN80 308 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 MYF5P13349 255 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 SLC25A42Q86VD7 318 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 FN3KRPQ9HA64 309 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 ABI3Q9P2A4 366 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 OR6C76A6NM76 312 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 RER1O15258 196 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 ST8SIA3O43173 380 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 PNPP00491 289 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 FAHP16930 419 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 ECI1P42126 302 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 FAM219AQ8IW50 185 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 NPAS1Q99742 590 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 VN1R1Q9GZP7 353 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
PTPRU-201ENST00000345512 KNTC1P50748 2209 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 LILRA5A6NI73 299 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 HSPB6O14558 160 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 ADAM11O75078 769 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 HOXD4P09016 255 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 CTRB1P17538 263 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 MSR1P21757 451 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 EIF1P41567 113 aaKnown RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF133P52736 654 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 S100A12P80511 92 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 CTRB2Q6GPI1 263 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 LILRB2Q8N423 598 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 MMP26Q9NRE1 261 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 TNFSF18Q9UNG2 199 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 SFTA3P0C7M3 94 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 OTX2P32243 289 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 SLC16A14Q7RTX9 510 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 PTPMT1Q8WUK0 201 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 IL1F10Q8WWZ1 152 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 PIPOXQ9P0Z9 390 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 PURGQ9UJV8 347 aaKnown RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 VSIG4Q9Y279 399 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 BCAT2O15382 392 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-201ENST00000345512 IL34Q6ZMJ4 242 aa13.87□□□□□ -0.19
PTPRU-201ENST00000345512 UMAD1C9J7I0 102 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 SFT2D2O95562 160 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 GP1BAP07359 652 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 HLA-DOBP13765 273 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 INSM1Q01101 510 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 MYBPHQ13203 477 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 C9orf135Q5VTT2 229 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 MRPL21Q7Z2W9 205 aaKnown RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 NAA40Q86UY6 237 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ADAD2Q8NCV1 583 aaKnown RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 NANPQ8TBE9 248 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ADAT1Q9BUB4 502 aaKnown RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 URGCP-MRPS24S4R325 110 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 A0A1W2PPC1 479 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 FAM74A7A6NL05 159 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 M0R135 149 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 MSTNO14793 375 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 BGLAPP02818 100 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 OR3A4PP47883 348 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 FAM74A3Q4VXF1 159 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 TMEM182Q6ZP80 229 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-201ENST00000345512 STPG2Q8N412 459 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 SEMA6DQ8NFY4 1073 aa13.86□□□□□ -0.19
PTPRU-201ENST00000345512 ZNF799Q96GE5 643 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms