RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SFXN4Q6P4A7 337 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CNIH3Q8TBE1 160 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MRPS24Q96EL2 167 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HINT2Q9BX68 163 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 A0A0U1RQF3 1178 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CD300LBA8K4G0 201 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ANKRD63C9JTQ0 380 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 VIPP01282 170 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RPS14P62263 151 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TARBP2Q15633 366 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR4C12Q96R67 309 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GINS3Q9BRX5 216 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RTL8AQ9BWD3 113 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NMES1Q9C002 83 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SERTAD4Q9NUC0 356 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HEATR5BQ9P2D3 2071 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RNASET2O00584 256 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 AVPR2P30518 371 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 LIPAP38571 399 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SURF2Q15527 256 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TP53I3Q53FA7 332 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C1orf185Q5T7R7 199 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RCE1Q9Y256 329 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MT-CO3P00414 261 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 F11P03951 625 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CAPZBP47756 277 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MMP16P51512 607 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NKD1Q969G9 470 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GRHPRQ9UBQ7 328 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C21orf33P30042 268 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SSTR5P35346 364 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MTPNP58546 118 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RHBDD2Q6NTF9 364 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR5D18Q8NGL1 313 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NEUROG1Q92886 237 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SLC35G5Q96KT7 338 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ICAM5Q9UMF0 924 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CENPVL1A0A0U1RR11 272 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MPZL1O95297 269 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HMGA1P17096 107 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HTR1DP28221 377 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GGTA1PQ4G0N0 100 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 Q6ZRG5 221 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CERS5Q8N5B7 392 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL38Q96DV4 380 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SLC2A13Q96QE2 648 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM189A5PLL7 270 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TLCD2A6NGC4 264 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 LDLRAD4O15165 306 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HCRTR1O43613 425 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM10L1P0DMW3 83 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PNLIPRP2P54317 469 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF660Q6AZW8 331 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM10Q96HG1 83 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF302Q9NR11 478 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MTCH1Q9NZJ7 389 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF133P52736 654 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RING1Q06587 406 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SLC10A2Q12908 348 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MFSD14BQ5SR56 506 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 FEVQ99581 238 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SERTAD3Q9UJW9 196 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF724A8MTY0 619 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CD14P08571 375 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C1SP09871 688 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MFAP5Q13361 173 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 KCNMB1Q16558 191 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM220Q6QAJ8 160 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 VHLLQ6RSH7 139 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PHOSPHO1Q8TCT1 267 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A51Q9H1U9 297 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HMX2A2RU54 273 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PSG6Q00889 435 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NRG1Q02297 640 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RAB32Q13637 225 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM136Q6ZRR5 245 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MRGPRGQ86SM5 289 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR8I2Q8N0Y5 310 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PNPLA1Q8N8W4 532 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 DTWD2Q8NBA8 298 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GHSRQ92847 366 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 NDFIP1Q9BT67 221 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PLEKHJ1Q9NW61 149 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MTFP1Q9UDX5 166 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MYH7P12883 1935 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 DUS4LO95620 317 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ATP5G1P05496 136 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 P2RY2P41231 377 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ATP5G3P48201 142 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 DAP3P51398 398 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 UBE2NP61088 152 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ATP5G2Q06055 141 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ERFEQ4G0M1 354 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 FRG2Q64ET8 278 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OLIG1Q8TAK6 271 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 FRG2BQ96QU4 278 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms